Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00612 ATGTATCTCCCCCGCCGCATCCTCACCGGACTCTCCCCGCACCGCCGCCACTTCTCCCACTCCGCCGCCCTCCTCCTCCACCCCCCGGAGCCGGAGCATACCTACCTTGACGGCTTTCCCCGGCCGGATCCCAAGTACGACGAGACGATCCTCGCCGTCCCCCGCGCCGACTCCGGCAAAAACATCTCGGCGAAGGAGCGCCGCGCCGGCCGCGTGCCGAGCATCGTGTTCGAGCAGGAGGACGGCCAGCACGGCGGCAACAAGCGCCTCATCTCCGTCCGCACCGACCAGATCAGGAAGCTCGTCAGCCACCTCGGCCGCTCCTTCTTCCTCTCCCGCCTCTTCCACCTCGAAGTACGCCCGCAGTTCGACTCCGACGACGTCGTCGAGAGCGTTCGCGTTTTGCCGCGCAAGGTTCATTTGAAAGCTGGTTCGGACGCGCCGTTGAATGTGACGTTTATTAGGGCTCCGTCGCATGCTTTGTTGAAAGTCGAGGTTCCTCTCGTCTTCAGAGGAGAAGATGTGTCGCCTGGACTCAAGAAAGGTGCTGCTTTGAATACCATCAAAAGGACTGTCAAGTACTTATGCCCTGCTGACATTATTCCCCCGTATATTGATGTGGATTTAAGTGAGTTGGACGTCGGCCAGAAGTTAGTCATGGGAGATCTCAATGTTCATCCTGCTTTAAAACTACTTCAGTCAAAAGACGAAGCTGTTTGTAAAATTATGGGCCAAAGAGTTTCTGAAATACAAAAGAAATCTAAGTAA 768 0.5638 MYLPRRILTGLSPHRRHFSHSAALLLHPPEPEHTYLDGFPRPDPKYDETILAVPRADSGKNISAKERRAGRVPSIVFEQEDGQHGGNKRLISVRTDQIRKLVSHLGRSFFLSRLFHLEVRPQFDSDDVVESVRVLPRKVHLKAGSDAPLNVTFIRAPSHALLKVEVPLVFRGEDVSPGLKKGAALNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLNVHPALKLLQSKDEAVCKIMGQRVSEIQKKSK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00612 255 Gene3D Ribosomal Protein L25; Chain P 49 156 IPR020056 -
Cca07g00612 255 Pfam Ribosomal protein TL5, C-terminal domain 162 244 IPR020057 -
Cca07g00612 255 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 16 253 - -
Cca07g00612 255 CDD Ribosomal_L25_TL5_CTC 49 155 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Cca07g00612 255 PANTHER BNAA01G13300D PROTEIN 16 253 - -
Cca07g00612 255 Pfam Ribosomal L25p family 52 153 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Cca07g00612 255 Gene3D Ribosomal protein L25, beta domain 160 251 IPR037121 -
Cca07g00612 255 SUPERFAMILY Ribosomal protein L25-like 54 244 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00612 Cca-Chr7 8805184 8808489 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00612 K02897 - gmx:100809143 441.81