Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00607 ATGGGTGTTTCCGTTGGTTCACATTCTCAAAAGGGTTCATGGGATTCCTTGAAGTTCTTAACTAGAAGGAAGCAGGTTGATTCCTCACGTAGGAACGTTGAGCCTCTCCTTGCCAAGGAGCTAAATATTCCTGATCTCATTGCAGTTGGGGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTGGTGGGAACGGTTGCACGAGAGCATGCTGGACCAGCTTTGGCAGTTTCTTTTCTGATTGCAGGATTAGCAGCTGCTCTTTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGTTGCCCTTCTGCTGGAAGTGCATATCACTATTCATACATTTGTCTTGGTGAAGGTgttgcttggttgattggttggtCCTTGATATTGGAATATACAATCGGTAGTGCTGCTGTTGCTCGTGGCATAACCCCCAATTTGGGTGCACTTTTTGGTGGTGCGGATAATTTACCCATCTTCTTAGCGCGCCATTATATTCCTGGAACAGATGTGGCTGTGGATCCATGTGCAGCAATCTTGGTATTAGTTGTTACTGGACTCTTATGTGTGGGGATCAAAGAGAGCACAGCGATACAAAGCATAGTGACAACGGTGAATGTATGTGCATTGCTTTTTGTCATAGCAGCTGGTGGTTACGTGGGATTCAAATCTGGATGGGTTGGATATGAACTTCCTATGGGGTTTTTCCCCTTTGGGGTTGATGGGATGCTGGCTGGTTCTGCAACAGTGTTCTTTGCATATATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTAAAAAATCCTCAACGAGATTTACCCCTTGGTATTGGTGGTTCACTGTTTCTTTGTTGTGGGATTTATATGATGGTGTCCGTTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCGGATACCCCAATATCATCTGCATTTGCTAATCAAGGGATGCAATGGGCAGCTTACATTATAAATGCTGGAGCTTTCACAGCTCTCTGCTCAGCTTTGTTGGGTGGAATACTTCCCCAGCCACGAATTTTGATGTCTATGGCAAGGGATGGGCTACTGCCACCTTTTTTTTCTGATATAAATAAGCAGACTCAAGTTCCTGTTAAGGGCACAATAGCTACTGGTGTTATGGCTTCAATCTTGGCATTTTTTATGGAAGTCTCTCAACTGGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAGTGTCTGTGTTGATCCTAAGATATATTCCTCCAGATGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGTTTCGGTGTTAAAGCGGTGTAGTTTGAACAGTGCAGAGACAGATGTGGAATATACAGATGCTGCAAATGTTGGTACTGCTGAGGACAGAAAGCCTTTAATTGTTAAGGAAGATGTTATGATTGATTTTGCTAAACATCTTGCTGTAGGCAACCATCTAAATGAAGGTAACAGGCGAATTGTTGTTGGGTGGATCATAGCATTCATATGTTTAGGGGCGTTTGTCCTTGCATACGCTGCTTCAGATTTAACTCTTCTTAGTTATATTCGCTTCGCATTTTGTGGAGTAGGAGGTGCTCTTCTTTTGTGTTGTTTTGTTTTCCTAACCTGTATAGATCAAGATGACGCACGGCATAACTTTGGGCACTCTGGAG 1675 0.431 MGVSVGSHSQKGSWDSLKFLTRRKQVDSSRRNVEPLLAKELNIPDLIAVGVGSTIGAGVYVLVGTVAREHAGPALAVSFLIAGLAAALSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWSLILEYTIGSAAVARGITPNLGALFGGADNLPIFLARHYIPGTDVAVDPCAAILVLVVTGLLCVGIKESTAIQSIVTTVNVCALLFVIAAGGYVGFKSGWVGYELPMGFFPFGVDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGSLFLCCGIYMMVSVVVVGLVPYYAIDPDTPISSAFANQGMQWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFSDINKQTQVPVKGTIATGVMASILAFFMEVSQLAGMVSVGTLLAFTMVAVSVLILRYIPPDEVPLPPSLQDSIVSVLKRCSLNSAETDVEYTDAANVGTAEDRKPLIVKEDVMIDFAKHLAVGNHLNEGNRRIVVGWIIAFICLGAFVLAYAASDLTLLSYIRFAFCGVGGALLLCCFVFLTCIDQDDARHNFGHSG 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00607 558 PANTHER PROTEIN, PUTATIVE-RELATED 11 558 - -
Cca07g00607 558 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 11 558 - -
Cca07g00607 558 Gene3D Amino acid/polyamine transporter I 37 438 - -
Cca07g00607 558 Pfam Amino acid permease 44 423 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00607 Cca-Chr7 8730216 8744307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00607 17 558 Organic Solute Cotransporters AT5G36940 66.606 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00607 K13863 - gmx:100784895 956.822