Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00604 ATGATGGATTATACATACGACACCAAGCACCGCACTGTTGCCATTGAACCTCATCCTCATGGGATAAGGAATGTAACAGACTTGGAGCGTCATGTTCACTATCTGGAAACTGAGGCTTATACTTCTATTTTGAAGGCTTTCATTGCTCAATCTGATCTTCTTACTTGGGGAAAAGAGGGGCTTATGACTGAGCTGCGAAAGGAACTAAACATTACAGATATTGAACATGGAGAAATTCTAACGAAAATAAATTCAGATGAGTTAATTAAGCGAATAAGGGAGCAGAGAAAACTGTCATCTCATGCTAAGGATTATATTAAAGCTAGTGCTCCTGCTTGTGCTTCTGTTTCGATGGGAAATTCAATGATAAGATTAAAAACTCCATCCTCTGCTACACTTTTTACCCAGAAGAAAATGTCACGCAGCCAAGCTTCTCTAATTTCTATTCCTGTTCCTTCTTCAATGCCCCCAAAATTTAACGAGGTCCCATTGACTGCTGAATTTGCCCACGGAAATGTGGAGCATTCTATGGAAATGTTCAATTATAAAGTTCAGTTACCACCTACTGGAGGAGGGAGAGTGCTGAAAGGAAAGCACCAATTGCAGAAGGATTTTCACAGATCTGACTGCGTCAAGTTAAAGAAAAAATCTGATATAATTCAGATTCGTGCTACAGATATGGTTATCCATGATGTTGAGAAGATGCTTTTCAGTAGTGGGAAACCTGACCCAGTTGATATTGAGAGGGCAAAAAGGACTCTTAGGGAACAAGAAATAGCCATAACTGAAGCACTTGGTAAAGTGGTTGATGTGTTAGAAAGGGGTGATGCACCTAATCAGATGCAAAGTTATGGAGTCTCCAAGAATACTCCTGGAGGGCAAGAAATGAAGATACATGCTAATTACTGTAAACTAATTGGGAATGGTAGGTTGAATGAACTAGGTGATTCATTCTGA 957 0.3971 MMDYTYDTKHRTVAIEPHPHGIRNVTDLERHVHYLETEAYTSILKAFIAQSDLLTWGKEGLMTELRKELNITDIEHGEILTKINSDELIKRIREQRKLSSHAKDYIKASAPACASVSMGNSMIRLKTPSSATLFTQKKMSRSQASLISIPVPSSMPPKFNEVPLTAEFAHGNVEHSMEMFNYKVQLPPTGGGRVLKGKHQLQKDFHRSDCVKLKKKSDIIQIRATDMVIHDVEKMLFSSGKPDPVDIERAKRTLREQEIAITEALGKVVDVLERGDAPNQMQSYGVSKNTPGGQEMKIHANYCKLIGNGRLNELGDSF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00604 318 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 28 115 IPR005491 -
Cca07g00604 318 PANTHER OS10G0436850 PROTEIN 17 302 - -
Cca07g00604 318 SUPERFAMILY ENT-like 26 111 IPR036142 -
Cca07g00604 318 Pfam ENT domain 30 96 IPR005491 -
Cca07g00604 318 Coils Coil 247 267 - -
Cca07g00604 318 Gene3D ENT domain 24 155 IPR036142 -
Cca07g00604 318 SMART ENT_2 28 101 IPR005491 -
Cca07g00604 318 PANTHER PROTEIN EMSY-LIKE 4 17 302 IPR033485 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00604 Cca-Chr7 8675818 8682074 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00604 - - ccaj:109802952 628.246