Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00597 ATGGGGATTGCATCTCTTCTTGTGATCCGTGGGAACAGATGGGGTTTTGTGCACGTTGGAGTTTATAACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGAGATGTTCATTAGAGTTGGACTGGTGCAACTGATAGACTTGGATCTCACTGGGGTTTTCTGTTTCCTTAGTGGGGTTGGAATAGGTGCAATCTGTAGTCTAGTGAGTGGAATTTGGAGTCTTGTAATGCACAAGAGCTATGCCACAGAAGTATCCATTTATTCTTTCCTCATTGGCTATTTCATGTGTCGGTTGGCTATTGCATGGGCACAAGCATGTGTTTCAGCTTACTATGTTGCCTACGCAGAGAATCCACAGAGCACTCAGTTTGACTCGACTATTCCAGTACGCTTGGAGCAGCTTAATAGATCTCAAGCTTTGCAAATATTCAGAGCTAATAATTTGATCTGA 453 0.4305 MGIASLLVIRGNRWGFVHVGVYNKGFVQASSDTWEMFIRVGLVQLIDLDLTGVFCFLSGVGIGAICSLVSGIWSLVMHKSYATEVSIYSFLIGYFMCRLAIAWAQACVSAYYVAYAENPQSTQFDSTIPVRLEQLNRSQALQIFRANNLI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00597 150 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 1 139 IPR007603 GO:0022857|GO:0055085
Cca07g00597 150 Pfam Plasma-membrane choline transporter 12 119 IPR007603 GO:0022857|GO:0055085
Cca07g00597 150 PANTHER F20H23.27 PROTEIN-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00597 Cca-Chr7 8603340 8603926 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00597 - - gmx:100818674 289.271