Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca07g00576 | ATGAATAAGCAATTTTATGCTTCAAGAACCGATATCCAGACGTCGTCTTTCTCTTTGCTGCTAGTCCGCGTTTGGTGTTTCACAATTGTGACTCTCAGTTGCAAGCCCATTTGTGAATCTCTCATTGCTAGTAGATTGAAGAAACCTGAAACAGTAGATCTCCCTTGTTGCCTTCTGATCCTTACCAGAGTTCAGGCTAGAATCAGAGCTGACTATGTTGACAAGAGGCTGAGTTCTAATCTTGATGACTCTCAAGGTCCCTTGACTATTGATTACAGTTCTCTACTACAGGAGGGTGAATTCCACAGACTGGCTGATTCCACAATACATAGCCTACAAGAGAAATTAGAGGACTATGGAGACTCAGTTGAAGTTGATGGATTTGACATAGACTATGGGAATGATGTATTGACTGTAAAACTTGGCGATCTTGGCACCTATGTTTTGAACAAACAAACACCAAATAGACAACTCTGGCTGTCTTCTCCAGTAAGTGGTCCATCAAGGTTTGATTGGGATCGGGATACTAAAGCTTGGATTTATAGGCGGAACAAAGCAAACTTATATAAAATTTTGGAAGGTGAATTGGAGCAGTTATGTGGCAAACCTATTGTACTTTCCTAA | 624 | 0.4071 | MNKQFYASRTDIQTSSFSLLLVRVWCFTIVTLSCKPICESLIASRLKKPETVDLPCCLLILTRVQARIRADYVDKRLSSNLDDSQGPLTIDYSSLLQEGEFHRLADSTIHSLQEKLEDYGDSVEVDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDRDTKAWIYRRNKANLYKILEGELEQLCGKPIVLS | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca07g00576 | 207 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | - | - | |
| Cca07g00576 | 207 | PANTHER | FRATAXIN | 83 | 207 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | Gene3D | Frataxin/CyaY | 88 | 207 | IPR036524 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | TIGRFAM | mito_frataxin: frataxin | 100 | 197 | IPR017789 | GO:0004322|GO:0005739 | |
| Cca07g00576 | 207 | PRINTS | Frataxin signature | 96 | 114 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | PRINTS | Frataxin signature | 149 | 164 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | PRINTS | Frataxin signature | 134 | 149 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | Pfam | Frataxin-like domain | 97 | 203 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | SUPERFAMILY | Frataxin/Nqo15-like | 86 | 204 | IPR036524 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | PANTHER | BNAA09G01420D PROTEIN | 83 | 207 | - | - | |
| Cca07g00576 | 207 | ProSitePatterns | Frataxin family signature. | 148 | 162 | IPR020895 | - | |
| Cca07g00576 | 207 | CDD | Frataxin | 96 | 204 | - | - | |
| Cca07g00576 | 207 | SMART | Frataxin_Cyay_2 | 96 | 207 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | ProSiteProfiles | Frataxin family profile. | 96 | 204 | IPR002908 | GO:0008199|GO:0016226 | |
| Cca07g00576 | 207 | TIGRFAM | FeS_CyaY: iron donor protein CyaY | 98 | 205 | IPR002908 | GO:0008199|GO:0016226 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca07g00576 | K19054 | - | gmx:100811801 | 260.766 |