Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00574 ATGTCTCTACCACTTTCTTCTCCAAAATGGCTCACGCTCACCATATCTGCTAAACCACTCAACTCAATTCTATGTTATCTTGTTTTCCTCATCTTCGATCTTCTTGATGCTGTTTTCTGCGTTATCTATGGATACCTTGATGAACGCATTGAAGGGGAGGCTTCCCCTTGTTGCTGCTCTAACCGGGAAAGGCAGAAGAGGAGGATGAATGTGGCAGATGATGGTCTATCTGATAGCTTGTATGAGAGGAAGAACACTTTCAGGGAAATGGGGTTCCTTCAATTTGGGAGAAAGAAGGAAGGTTCCAATAGAAAACATGGTGGAGGTGGTGGAAGGTCACTGAACCGTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCATGGGCCAATGATGGAAGTGACTATAAACTTCATTTTGTTTTGAAGGAGCCCTTGTTGGTCACTGGTGAGAACTTCAGGGGAAACTCTTCTGAGAATGTGATATTCTTGCATGGATTTATGTGCTCTTCTTCATTTTGGACACAGACAGTGTTTCCATATTTTTCTGAAGAAGTGAATGGTGACTACAGATTGATTGCCGTAGACCTGCTAGGATTTGGTAAGAGTCCAAAGCCAAGAGATTGCTCATACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGATTCAACCGTTGGAGTTAAGTAGTTTTCACTTGGTTGCACATTCCATGGGTTGCATAATTGCATTGGCCCTGGCTGCAAAGTATCCCATGAGTGTAAAATCAATCACCCTTGTTGCTCCTCCATACACATCTTCAGAGGGAAATGATGCTTGTTTAAATGCACTATCAATGCTTGCTGGAAAGAAACTGTGGTCCCCATTGTCATTTGGTTCTTCATTTATGTCATGGTATGAGCACTTGGGTCGAACCGTTTGCCTTGTCTATTGCAGAAATCACAGAATGTGGGAGAGCATTCTAAAATTCATTACTCGCAAGAGGGATCTTCATTTCTTGACCATGGACATGACCAGGCACACTCATCATTCAGCTTGGAGTTCCATGCATAATGTGATATGTGGGGGAGCAAAATTTGTGGATACTTACCTTATAATTTTGACCAAAGTTGGTGTCAGAATAAGTGTCATTCAAGGTGATCAAGATCAGGTTGTCCCAATGGAGTGTTGTAGAAACTTCAAGTTGAAGGCTCCAAATGCTGAAATCAACATCATTCCAAATGCAGATCACAGCACTGTAATATTTGGCAGAGAGAAGGAATTTGCATATAGTCTGGAGCATACATGGGAATCTTGCTGTTGA 1305 0.4207 MSLPLSSPKWLTLTISAKPLNSILCYLVFLIFDLLDAVFCVIYGYLDERIEGEASPCCCSNRERQKRRMNVADDGLSDSLYERKNTFREMGFLQFGRKKEGSNRKHGGGGGRSLNRWSDCGCESCLSWANDGSDYKLHFVLKEPLLVTGENFRGNSSENVIFLHGFMCSSSFWTQTVFPYFSEEVNGDYRLIAVDLLGFGKSPKPRDCSYTLKDHVEMIEKSVIQPLELSSFHLVAHSMGCIIALALAAKYPMSVKSITLVAPPYTSSEGNDACLNALSMLAGKKLWSPLSFGSSFMSWYEHLGRTVCLVYCRNHRMWESILKFITRKRDLHFLTMDMTRHTHHSAWSSMHNVICGGAKFVDTYLIILTKVGVRISVIQGDQDQVVPMECCRNFKLKAPNAEINIIPNADHSTVIFGREKEFAYSLEHTWESCC 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00574 434 Pfam alpha/beta hydrolase fold 160 265 IPR000073 -
Cca07g00574 434 SUPERFAMILY alpha/beta-Hydrolases 154 413 IPR029058 -
Cca07g00574 434 PRINTS Alpha/beta hydrolase fold signature 188 203 IPR000073 -
Cca07g00574 434 PRINTS Alpha/beta hydrolase fold signature 234 247 IPR000073 -
Cca07g00574 434 PRINTS Alpha/beta hydrolase fold signature 248 261 IPR000073 -
Cca07g00574 434 PANTHER HYDROLASE 32 433 - -
Cca07g00574 434 Gene3D alpha/beta hydrolase 147 432 IPR029058 -
Cca07g00574 434 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 32 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00574 Cca-Chr7 8263437 8266263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00574 20 433 Acyl Lipid Metabolism Gene Families AT5G17780 50.120 1.73e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00574 - - ccaj:109802537 882.478