Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00567 ATGAATATGAATCTAAACACCCTTTTTTGGGGTGTGATATTTGTGTTAGTTTGTTCTATTACAAACTCATTGGCTTCAAGGCACTGCCATTTTCCTGCCATATTCAACTTTGGGGACTCAAATTCAGACACTGGAGGCCTTTCTGCTGCCTTTGGACAAGCTGGTCCTCCTCATGGAGAGTCCTACTTTCATCACCCTGCAGGCCGTTACTGTGATGGTCGTCTCATTGTTGATTTCATAGCTAAGAAGCTGGGCCTGCCTTATTTGAATGCATATCTTGATTCTGTTGGGTCAAATTATAGCCATGGAGCCAACTTTGCAACTGCTGGATCCACCATTAGACCCCAAAACACAACCCTTCATCAAACTGGTGGTTTCAGCCCTTTCTCTTTGGATGTTCAATTCAATCAATTCAGTGATTTCCAGCGCAGGACACAATCTTTTCGCAATAAAGGTGGAGTATATAAAACATTGCTACCAAAAGCAGAAGACTTTTCTGGTGCATTGTACACGTTTGATATTGGTCAGAATGACTTGACTTCTGGTTACTTCCACAACATGTCCACGGATCAAGTAAAAGCATATGTTCCAGATGTTTTGGCTCAATTCAAGACTGTACTCAAGTATGTGTATGATCATGGAGGAAGGTCATTTTGGGTTCACAATACTGGTCCTGTTGGTTGTGTGCCATACATCTTGGATCTTCACCCAGTGAAACCATCATTACTGGACAAAGCAGGATGTGCAACCCCTTATAATGAAGTGGCCAAGTTCTTCAACCGTGGATTGAAAGAAGTTGTGGTTCAACTCAGGAAAGAACTTCCCTTGGCTGCCATCACCTATGTTGATGTCTACTCAGTGAAGTACTCTCTCATTAGTCAAGCAACGAAGCATGGTTTTGAGGAGCCTCTGAGAGCATGTTGTGGGCATGGTGGGAAGTACAACTACAACTTACACATTGGATGTGGTGCCAAGATTAAGGTTCATGGCAAAGAGATTCTGATTGGAAAGCCATGCAAGGATCCTTCTGTTAGGATTAATTGGGATGGTGTTCATTTCACTCAGGCTGCAAACAAATGGGTGTTTGATCATATTGTAGATGGTTCATTTTCTGATCCACCTATTCCTTTGAACATGGCTTGTCATAAGCATCTTTAA 1158 0.4231 MNMNLNTLFWGVIFVLVCSITNSLASRHCHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESYFHHPAGRYCDGRLIVDFIAKKLGLPYLNAYLDSVGSNYSHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFNQFSDFQRRTQSFRNKGGVYKTLLPKAEDFSGALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDVLAQFKTVLKYVYDHGGRSFWVHNTGPVGCVPYILDLHPVKPSLLDKAGCATPYNEVAKFFNRGLKEVVVQLRKELPLAAITYVDVYSVKYSLISQATKHGFEEPLRACCGHGGKYNYNLHIGCGAKIKVHGKEILIGKPCKDPSVRINWDGVHFTQAANKWVFDHIVDGSFSDPPIPLNMACHKHL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00567 385 Gene3D SGNH hydrolase 20 368 IPR036514 -
Cca07g00567 385 PANTHER BNAA06G32900D PROTEIN 25 383 - -
Cca07g00567 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 383 - -
Cca07g00567 385 CDD SGNH_plant_lipase_like 32 369 IPR035669 -
Cca07g00567 385 Pfam GDSL-like Lipase/Acylhydrolase 34 365 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00567 Cca-Chr7 8162847 8167153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00567 32 384 Acyl Lipid Metabolism Gene Families AT4G10950 29.781 9.86e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00567 - - gmx:100819985 735.717