Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00558 ATGGAAGGGAATCCAAAGCAGAAGTTGCTTCTTGGAAGAGAGAAAGCATCAGAAGAAGAGGAAGAATCTTTGGCTAAGAGGGTATGGAAAGAGAGCAAGGTTATGTGGATAGTGGCAGCACCAGGCATATTCACAAGGTTCACCACCTTTGGTATCAGTGTCATAAGCCAAGCATTTGTTGGCCATATTGGCTCAACGCAACTCGCTGCTTTTGCTCTTGTATTCACTGTCCTCATACGCTTTGCCAATGGTATTCTGTTAGGAATGGCAAGTGCATTGACAACACTTTGTGGACAAGCATACGGTGCAAAAGAATATGACATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCACTATGTCTTCTCCCCTTGTTGATCTTTACAACCCCAATCATGGTAATCTTAGGCCAAGAAAAAAGTATAGCAGAAGCGGCAGGAACAATTTCCCTTTGGTCAATCCCAATCTTATTTGCTTACATTGTCTCATTCAATTGTCAGACATTCTTGCAATCTCAAAACAAGAATGTTATTATTTCATTCTTGGCAGCTTTCTCAATAATTATTCATTTATTCCTCTCTTGGCTATTGACAATAAAATTCAAGCTTGGGATTCCTGGGGCAATGACTTCAACAATTTTAGCATACTGGATTCCCAACATTGGTCAACTAATATTTATTACATGTGGTTGGTGCCCAAAAACATGGCATGGCTTCTCATTTTTAGCATTCAAGGATCTTTGGCCTTTGGTGAAGCTTTCCCTTTCATCTGGTGTCATGTTATGTCTTGAGCTTTGGTACAACACGATATTAGTTCTTTTGACTGGCAACATGAAAAATGCAGAGGTTGAAATTGATGCTCTATCTATATGTCTTAACATCAACGGATGGGAAATGATGATATCATTTGGTTTTATGGCCGCATCTAGTGTTCGAGTGGCAAATGAACTTGGAAGAGGAAGCTCAAAAGCCGCAAAGTTCTCTATAGTTGTGACAGTAGTTACATCCTTTACAATTGGATTCGTCTTATTTCTATTTTTCTTATTTTTTAGAGAAAGAGTTGCCTATGTGTTTACTTCAAATGAAGACGTGGTCATTGCTGTTGGGGATTTGTCACCTTTATTAGCAATTTCTTTGTTATTAAATAGTGTTCAACCTGTACTCTCAGGGGTTGCTGTTGGAGCAGGGTGGCAAAGCATTGTAGCATATGTGAATATAGGGTGTTATTACATCATAGGTATTCCAATTGGAATGGTACTTGGTAACATTTTTAACTGGAAAGTCAAGGGTATTTGGATTGGAATGTTGCTTGGGACACTAATTCAGACGATAATCCTCATTATAATAACCTGCAAAACTAATTGGGATGAGCAGGTAATTATAGCTCGTAATCGTATTAATAAGTGGTCCAAGGTGGATCTTGATCATGAAACAATTACATCAAATAATTAG 1467 0.3824 MEGNPKQKLLLGREKASEEEEESLAKRVWKESKVMWIVAAPGIFTRFTTFGISVISQAFVGHIGSTQLAAFALVFTVLIRFANGILLGMASALTTLCGQAYGAKEYDMMGVYLQRSWIVLFLTALCLLPLLIFTTPIMVILGQEKSIAEAAGTISLWSIPILFAYIVSFNCQTFLQSQNKNVIISFLAAFSIIIHLFLSWLLTIKFKLGIPGAMTSTILAYWIPNIGQLIFITCGWCPKTWHGFSFLAFKDLWPLVKLSLSSGVMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISFGFMAASSVRVANELGRGSSKAAKFSIVVTVVTSFTIGFVLFLFFLFFRERVAYVFTSNEDVVIAVGDLSPLLAISLLLNSVQPVLSGVAVGAGWQSIVAYVNIGCYYIIGIPIGMVLGNIFNWKVKGIWIGMLLGTLIQTIILIIITCKTNWDEQVIIARNRINKWSKVDLDHETITSNN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00558 488 PANTHER PROTEIN DETOXIFICATION 13 475 - -
Cca07g00558 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 475 - -
Cca07g00558 488 Pfam MatE 264 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Cca07g00558 488 Pfam MatE 41 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Cca07g00558 488 CDD MATE_eukaryotic 31 464 IPR045069 GO:0042910|GO:1990961
Cca07g00558 488 TIGRFAM matE: MATE efflux family protein 43 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00558 Cca-Chr7 7943272 7947232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00558 K03327 - gmx:100777237 742.265