Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00557 ATGTCTTCAAGAACGTTGAGGAGAAGACTCCATCATGGGGATGTTGATGGAAAAAGGCAGGAGCATTTCGAGACTTCGGGATTAGATTCTTTGAGTGAGCCATTGCTGGCAGATGATGATTATGTTGAGAATAAGAAGATATGTACACTTGAAGATCCATGGGACGATGAGAGGAAGAAGGCACAATTTCATTGGACATTCATATTCTCAAACCTCATTGTGCAATGGGCACAGTGGTTAGCAAATGTTGTACTTGGATCTGGATCTCTTATTGGGCGACTTTTATCATTTCCTTCTTCTGCTTTAAATATGCAAAACAATAAGATCCTTCCTCCATCTCTAAGCCCTCTACAGGAAGAAAGACTAAGAAGCCTACGACAAAGGCTTGAAGTACCCTTTGATGGTTCTAAAGCAGAGCACCAAGATGCACTTAAACAGTTGTGGAAATTGGCCTATCCTGACAGGGAGCTTCCTTCTCTTAAATCAGATCTTTGGAAGGAAATGGGATGGCAAGGATCAGATCCTTCAACTGATTTTAGGGGTGGAGGATTTATATCATTAGAGAATCTCATCTTCTTTGCGATGAAGTATCCGGATTCATTCCAACGATTATTGCATAAACAAGATGGAACCAGAGCTGATTGGGAATATCCATTTGCAGTAGCTGGAATCAATATTTCTTTCATGTTGGCACAAATGCTGGATCTTCAAGCAGGGCTTCCATCTTCTACGTCAGGTGTTTGTTTTCTTAAGTTGCTTGAGGAGGATGAAATGGCATTCGATATCCTTTTTTGTGTTGCCTTTCAAATGATGGATGCTCAATGGCTAGCAAAGCGTGCAACATATATGGAATTTAATGATGTTTTGAAGTCCACAAGAACACAGTTAGAGCGTGAGCTTGCGCTTGAAGACATCTCTAGCGTGAGAGATTTACCTGCTTACAACATGTTGAGATGA 957 0.4096 MSSRTLRRRLHHGDVDGKRQEHFETSGLDSLSEPLLADDDYVENKKICTLEDPWDDERKKAQFHWTFIFSNLIVQWAQWLANVVLGSGSLIGRLLSFPSSALNMQNNKILPPSLSPLQEERLRSLRQRLEVPFDGSKAEHQDALKQLWKLAYPDRELPSLKSDLWKEMGWQGSDPSTDFRGGGFISLENLIFFAMKYPDSFQRLLHKQDGTRADWEYPFAVAGINISFMLAQMLDLQAGLPSSTSGVCFLKLLEEDEMAFDILFCVAFQMMDAQWLAKRATYMEFNDVLKSTRTQLERELALEDISSVRDLPAYNMLR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00557 318 Pfam ELMO/CED-12 family 124 289 IPR006816 -
Cca07g00557 318 PANTHER ELMO/CED-12 FAMILY PROTEIN 8 318 - -
Cca07g00557 318 ProSiteProfiles ELMO domain profile. 139 300 IPR006816 -
Cca07g00557 318 PANTHER ENGULFMENT AND CELL MOTILITY 8 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00557 Cca-Chr7 7933731 7942687 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00557 K23538 - gmx:100799350 594.734