Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00545 atgagaggagaaagagagagGAACAGCAGCAACacagggacagggacagggacggcgcagagaaggatagggtacaTAAACGCCCAAACGACGTCGTTGCAGCAGATCCGTCCCTCTCTCATAACGTGGTTCCTGCAGCGACCCCACTCCATCCCCTTCGTGCTCGCGCTCTTCCTCTTCCTCGCCTGGATCTCCCTCCGCGTGCAGCGCGCCGCCCACACGCTCCCCCGCTCCTCCGCCTCCGACCGCCGCGACGCCGCCGCCAGCCTCGTCCGCTTCCTCCCCTCGCGCGCCGCCAAGGACAACCGCGGCTGGCTCTTCGACCCCGTGGCGCTCGCCCTCGCTTCCGGCCTCAAAGGTGGAGCTGTCACGTGCGCCTCGCTTCACGTGGGAGAAATTCGACCTGGCAAATTCAGAGGGAATCACAGACACCACGATTCCAACGAGACTTTTCTCATTTGGGGCGCTGCCACCAGGTTTAGGTTAGAGAACAGCGAGGAAGATAATGGTTATGCCGAAGTGACCCTTGACAGAGATGAAATTGCTGTAGCTGCCAGTCCAGTTCACACAGCGCATGCTCTAGTGAACATTGATCCCATTCGTAGTACCTTCTTTATAGGGTGTCAAGACAGTATCGTAAACTATAATGCCTCTACTGACTTTAATGTTGCTGCACAGCATAATGAAAATATTAGACTTGGATCAAACTTCCAAGATTCTGGAGAAGGTCAAATCTCCAAGTTAAATCAGAAACAGAACAAGAGGGTGGCAGTTTTGGTGGGGTGCAATTACCCCAACACAAGCAACGAATTGCATGGTTGCATAAACGATGTGTTGGCAATGAAGGAGACACTGGTGAAGCGTTTTGGGTTTGATCCCAACAACATTGAGCTTCTCACTGATGCACCTGACTCTTGTTCTTCGTTGCCCACTGGTGCTAACATCAAGCAGGCACTGACTAACATGGTTGATGGAGCTGAAGCAGGGGATGTCCTCTTTTTTCACTATAGTGGACATGGAACCAGGATCCCTTCCAAGAAACGTGCCCACCCCTTTCGCCATGAGGAAGCAATTGTGCCTTGTGACTTCAATCTCATCACTGATTTGGACTTGAGGGAACTAGTGAACAAGCTGCCAAAGGGTGCAAGTCTGACAATATTCTCAGACTCATGCCACAGTGGAGGCCTAATAGACAAGGAGAAAGAACAAATTGGACCATCCTCAATGGTTCACCAAAACACCACCTTGAGAGGCTCTGACATCACCCCAAAGACGATCCCCTACGACTCCATACTCCACCACCTCTCATCACTGTCAAAAGTGAACACCACAGACATGGGAAGCCACCTGGTAGAGCTGTTCGGCTCAGAAGCCAGTTTGAGGTTTCGGCTGCCACTGGTTGACCTTGACTTGTTGGAACAAGTGATGAGGCCTGACGAGGGGATTCTGCTGAGTGGCTGCCAAGCAGATGAAACCTCAGCAGACATGAACGAGGGTGGTGGAAGGGCTTATGGGGCGTTCAGCAATGCGGTTCAGAGGGTGTTGGAGGAGAACCCCGGAAGGGTGAGTAATGCTGAGCTTGTGATCATGGCTAGGAAGATGCTGCAGAGTGGAGGGTTTGAGCAGCATCCTTGCCTCTATTGCAGTGATGACAATGCTCGTGCTGCATTCTTGTGCCAAGAACAATGA 1689 0.5033 MRGERERNSSNTGTGTGTAQRRIGYINAQTTSLQQIRPSLITWFLQRPHSIPFVLALFLFLAWISLRVQRAAHTLPRSSASDRRDAAASLVRFLPSRAAKDNRGWLFDPVALALASGLKGGAVTCASLHVGEIRPGKFRGNHRHHDSNETFLIWGAATRFRLENSEEDNGYAEVTLDRDEIAVAASPVHTAHALVNIDPIRSTFFIGCQDSIVNYNASTDFNVAAQHNENIRLGSNFQDSGEGQISKLNQKQNKRVAVLVGCNYPNTSNELHGCINDVLAMKETLVKRFGFDPNNIELLTDAPDSCSSLPTGANIKQALTNMVDGAEAGDVLFFHYSGHGTRIPSKKRAHPFRHEEAIVPCDFNLITDLDLRELVNKLPKGASLTIFSDSCHSGGLIDKEKEQIGPSSMVHQNTTLRGSDITPKTIPYDSILHHLSSLSKVNTTDMGSHLVELFGSEASLRFRLPLVDLDLLEQVMRPDEGILLSGCQADETSADMNEGGGRAYGAFSNAVQRVLEENPGRVSNAELVIMARKMLQSGGFEQHPCLYCSDDNARAAFLCQEQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00545 562 Gene3D Jelly Rolls 95 223 IPR014710 -
Cca07g00545 562 PANTHER METACASPASE-4 254 561 - -
Cca07g00545 562 SUPERFAMILY Caspase-like 250 377 IPR029030 -
Cca07g00545 562 MobiDBLite consensus disorder prediction 1 21 - -
Cca07g00545 562 PANTHER METACASPASE-9 254 561 - -
Cca07g00545 562 Pfam Caspase domain 254 552 - -
Cca07g00545 562 Gene3D - 252 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00545 Cca-Chr7 7782615 7788655 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00545 - - gmx:100781510 492.656