Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00526 ATGGGTTCATCCAAGGCCTCATGCAGTGTTTCTCTGCTCCAATTGTTCATAGTGGTTTGCCTTGTCTTCCAATGCTTTGCTAAAAACCATGCTGACCTGAGCACAACTCTAATTGTAAATGCTTCTGATGCGTCTGGAAAGCCTATACCAGAGACACTTTTTGGCATATTCTTTGAGGAGATCAATCATGCTGGAGCCGGGGGAATTTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACACTCCTTCAAATATTGATCCTTGGTCAGTTATTGGAAATGGATCACTGATAAATGTTGAAACTGATCGTACCTCTTTCTTTGACCGTAATAAGGTTGCACTTCGATTGGAGGTGTTATGTGACAGCAAAGGTGACAACATCTGCCCAGCTGATGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATACAAAGTGGTCTTCTATGTTCGTTCAACTGAATCACTTAATCTAACAGTTTCATTGACTGGATCAAATGGTGTAGGAAATCTGGCTTCATCTGTGATTACGGGTTCTGCACTTCATTTTTCTAACTGGACAAAGGTGGAGACTTTATTGGTTGCCAAAGAAACGAATCGTAACTCAAGACTTCAATTAACCACTACCACCAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACTGGACACATATAAGGGACATGGTTTCCGCAGTGAACTTGTTGAAATGCTGGCAGATTTGAAACCAAAATTTATCAGATTTCCGGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGATGGAAAGCAACTGTTGGACCATGGGAGGAGAGACCTGGGCACTTTGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTCCAACTAGCAGAGGACTTGGATGCTTTACCAATATGGGTATTTAATAATGGTGTCAGCCATAATGATCAAGTTGATACGTCAGCTGTCTTACCTTTTGTGCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGTGATCCCACTTCAAAATGGGGTTCCCTTAGAGCTGCTATGGGACACCCAGAGCCGTTTGACCTTAGATATGTTGCTGTTGGGAATGAAGATTGTGGAAAAAAGAACTATCGTGGAAATTACTTGGAATTCTACAAAGCAATAAGAAATGCTTATCCAGATATCCAAATTATCTCAAATTGTGATGGTTCCTCTCGACCTTTAGATCATCCAGCTGATATGTATGATTATCATGTTTATACAAATGCAAATGACATGTTTTCTAGAGCTAACGCATTTGATCGTACATCACGAGATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTGTGACTGGAAAAGATGCGGGGACAGGAAGCCTTTTGGCTGCCCTAGCTGAAGCTGGATTCCTTATTGGACTGGAAAAGAACAGTGATGCTGTCGAAATGGTCAGCTATGCTCCACTTTTTGTTAATGCCAATGATAGGAGGTGGAACCCAGATGCAATTGTTTTCAACTCCTTTCAGCACTATGGAACTCCTAGCTATTGGGTGCAACAATTCTTCTCGGAGTCAAGTGGAGCAACACTTCTAAGTACATCACTTCAAGCAACTTCCTCAAATTCACTTGTTGCATCAGCAATTACATTTCAAAGTTCCGTAGATAAGAAAAATTACATACGAATAAAGGTTGTGAACTTTGGTACCAACGCCGTGAACCTCAAAATCTCTATTGCCGGACTGGAACCAAACTCATTGCAGTTGTCTGGGTCACAGACTGTGCTTACCTCTGCAAATGTAATGGATGAGAACTCCTTCTCGCAGCCAAATAAGGTGGTGCCAAATCAGAGTCTACTGAAGAATGTTGGGAAAGACATGAATGTCACAGTCCCACCACGTTCGTTCACATCATTTGATTTGCTTAAAGAATCCAGTAATCTGAAGATGACAGGGAGCGAATCTTCCTCGAGGTCTTCTATTTAA 2025 0.4217 MGSSKASCSVSLLQLFIVVCLVFQCFAKNHADLSTTLIVNASDASGKPIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPNTPSNIDPWSVIGNGSLINVETDRTSFFDRNKVALRLEVLCDSKGDNICPADGVGVYNPGFWGMNIEQGKKYKVVFYVRSTESLNLTVSLTGSNGVGNLASSVITGSALHFSNWTKVETLLVAKETNRNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRSELVEMLADLKPKFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLDALPIWVFNNGVSHNDQVDTSAVLPFVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLEFYKAIRNAYPDIQIISNCDGSSRPLDHPADMYDYHVYTNANDMFSRANAFDRTSRDGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDAVEMVSYAPLFVNANDRRWNPDAIVFNSFQHYGTPSYWVQQFFSESSGATLLSTSLQATSSNSLVASAITFQSSVDKKNYIRIKVVNFGTNAVNLKISIAGLEPNSLQLSGSQTVLTSANVMDENSFSQPNKVVPNQSLLKNVGKDMNVTVPPRSFTSFDLLKESSNLKMTGSESSSRSSI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00526 674 SUPERFAMILY (Trans)glycosidases 213 544 IPR017853 -
Cca07g00526 674 SUPERFAMILY Galactose-binding domain-like 72 232 IPR008979 -
Cca07g00526 674 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 1 672 - -
Cca07g00526 674 SMART alpha_l_af_c 461 648 IPR010720 GO:0046373|GO:0046556
Cca07g00526 674 Pfam Alpha-L-arabinofuranosidase C-terminal domain 462 648 IPR010720 GO:0046373|GO:0046556
Cca07g00526 674 SUPERFAMILY Glycosyl hydrolase domain 527 652 - -
Cca07g00526 674 Gene3D Glycosidases 218 536 - -
Cca07g00526 674 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 672 - -
Cca07g00526 674 Gene3D - 537 654 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00526 Cca-Chr7 7513028 7525545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00526 1 671 Glycoside Hydrolase AT3G10740 68.935 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00526 K01209 - gmx:100787207 1233.78