Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00524 ATGGCGTTCTGTTCTCACAAGACTCTGTTTGGGATCATGCTTTATTCCATTGTGATCCATTTTCTTGCCTTGCAACATTGCTGTGCTGATGCAAACTCAACACTGGTTGTAAATGCTTCCAATAATGCAAGGAAAATTCCTAACACTTTTCATGGAGTATTCGTTGAGGAGATTAATCATGCTGGTGCTGGGGGACTGTGGGCAGAACTTGTTAGCAATAGAGGCTTTGAAGCTGGAGCCGAAAACAATATATTTTATCCTTGGACAATTATTGGTAATGAAGCATCAATTTCTGTATCAATTAGCCGTTCCTCTTGCTTTGACCGTAATAAAGCTGCATTAATTATGGAGGTTTATTGTGGTGGTCACAAACCTTGCCCATTTGGTGGCGTTGGTATCTCTAACCCTGGTTATTGGGGCATGAATATTGAGCAAGGGAAGTGGTATAAGGTGGTGTACCACGTTAAATCAGAAGGAAAGTTTGATTTTCAACTTTCATTCACGGGTGTTGATGTTAAAAAAGTGGCATCACATATTACGCATGTTCATGGACATGGAAAATGGAAGAGGGTGGAGACTATAGTGGAAGCAAAAGCTACTAATCACATTTCAAGCCTTCAAATAACCACAACAAGGAAAGGGAGTTACTTGTTAGACCAGGTGTCAGTTATGCCATTGGACACTTACAAGGGCCATGGCTTCCGAAAGGACCTTTTCCAAATGGTGGCAGATTTGAAACCAAAATTTCTCAGATTTCCAGGTGGTTGTTATGTTGAAGGAGCTTATCTCAAAGACCAATTTCAATGGAAAGATACTATTGGACCATGGGAAGAGAGACCTGGACACCATGATATGTGGGGCTATTGGAGTGACGATGGATTTGGTTTTTTAGAGTATCTTCAACTAGCAGAAGACCTTGGAGCAATGCCTATATGGGTGTTTAATGCTGGAATCAGCCTTAATGATGGAGTCAATAAATCAGCCATAGCACCTTATGTGCAAGATGCCCTCGATGGCATACAATTTGCAAGAGGCTCTCCTACATCGCCATGGGGTTCTGCTAGAGCTGCATTGGGACATCCTAAACCATTTGACTTGAGATATGTTGCCGTTGGAAATGAAAATTGTGGTCAACCTGATTATGAAGGAAATTACCTTTATTTCTATGAAGCTATAAGATCTGCCTACCCAGATATTCAAATTATTTCAAACTGTGATGCTTCTACCTCACCATTAAATCATCCATCTGATTTGTTCGATTTTCATATTTACACAGACTCCAATGACATATTTTCTAAGTCTTCTCATTTCGACCACACACCACGAACTGGTCCAAAGGCTTTTGTTAGTGAATATGCTGTGACGAAAAGAGATGCTGGAAATGGAAGTCTTTTGGCGGCAGTAGCTGAAGCTGCATTTCTTATTGGATTAGAAAAGAACAGTGATATTGTTGAGATGGTTTCTTATGCACCACTTTTCTTAAATATAAATGACAGGAGATGGATTCCCGATGCAATTGTGTTCAACTCATATCAGGTTTATGGAACTCCTAGCTATTGGGTGCAGAAACTTTTTAGTGAGTCCAGTGGAGCAACATTTCTTGACTCAACACTCAATACAAAATCTAATAAACTTATTGCATCTGCAATTATTTGGCAAAATTCCATGGATAAGAAAAACTACCTAAGAATAAAGGTAGTAAACTTTGAAACAACATCTGAAAGCCTTACCATTTTTATAAACGGGTTGAACTTAAATGTGCAACAATATGGTTCTACAAAGACAGTGTTTGCATCAAACAATGTAATGGATGAGAATTCCTTCTTAGAGCCAAAGAAGGTGGTGCCACAAACAAGTTCACTAGTCAATGCAGATAAGGACTTGAATGTGATTCTCTCTCCCTATTCAGTGACATCATTGGATTTTTTTCTTCGACTCTACCTCATCCTAGTGGCATGTCTTGTTTTTCAACGTTGTGCTTATGCTAACCATACTTCAACTCTGGTTGTAGATGCTTCTGGTTCATCTGGAAGGCCAATTCCTGAAACTCTTTTTGGAATATTTTTTGAGGAGATCAATCATGCTGGTGCTGGTGGATTGTGGGCAGAGCTTGTGAACAACAGAGGTTTTGAAGCCGGGGGCACTCGAGTTCCATCAAATATTGAACCATGGACTATTGTTGGACAAGAATCAGAAATTTTTATAGAAACTCAACGTAGTTCTTGCTTTGAACACAACAAGGTTGCATTGAAAATGGATGTGTTGTGCGATAATTGCCATGATGGTGTTGGTATCTCTAATCCTGGTTTTTGGGGCATGAATATTGTGCAAGGGAAGAAATACAAAGTTGTCTTCTTTGTTAGATCAAAAGCACCAATAGATATGAAAGTATCATTCAGAAAAACTGAAGGTGGAGGGATATTGGCTTCTAGCAATATCAAAGCTTCTGCATCAGAAGTTTCAAAGTGGAAAAGGATGGAGACTACATTAGTAGCTGATGCATCAAGTTCCAAGTCAAGTTTGTATTTAACAACAACCAAAAAAGGGGTGATATGGTTGGACCAAGTGTCTGCTATGCCTTTGGACACATTTAAGGGACATGGTTTCCGAAGTGACTTGGTTAATATGCTATTAGTATTGAAACCAGCCTTTTTCAGATTTCCAGGTGGCTGTTTTATTGAAGGACAAACATTAAGAAATGCATTTCGGTGGAAAGATAGTGTTGGACCTTGGGAACAGAGACCTGGGCACTTTGGTGATGTTTGGAGTTATTGGACAGATGATGGACTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAAGCCATTGTGGGTATTTAACAATGGCATAAGCCATACCGATGAAGTTGATACCAGTGTCATCACACCTTTTGTGCAAGATGCCCTTGATGGTATCGAGTTTGCCAGAGGTACAGCTACTTCAACATGGGGTTCCCTTAGAGCATCTATGGGGCACCCAAAGCCTTTTGACCTAAAATATGTCGCTGTAGGAAATGAAGATTGTGGGAAGAAAAACTACCTAGGCATGATCTCTCTTTCTCTTAGAAACTACCTAGCTTTCTACAAGGCAATAAAGCATGCTTATCCAGATATTCAAATTATTTCAAATTGTGATGCTTCTGCCAAACCTTTAGATCACCCAGCAGATCTCTATGATTATCACACTTATCTTCATGAATATCAACATATGTTTAATAACGCCCATGCGTTTGATAAGACACCACGAGATGGTCCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGACAAAGAAGCTAAGCTTGGAACCCTTTTGGGAGCTGTGTCCGAAGCTGGATTCCTTATTGGATTAGAAAGAAACAGTGATCATGTGATAATGGCTAGCTATGCGCCACTTTTTGTAAATGCAAATGACAGGAAGTGGAACCCAGATGCAATTGTCTTTAATTCCGATCAGGCTTATGGAACTCCTAGCTATTGGGTGCAGTTTATGTTTAAAGAGTCAAATGGAGCAACATTTCTCAAATCACAACTTCGAACACCTGACCCTAATTCAGTTGTTGCATCTGCAATTCTTTGGGAAAATTCCCATAATAAGAGAAGTTACTTGAGAATAAAGGTTGCAAACGTGGGAGACTATCAAGTAAATCTCAACATTTTACTTGATGGAATTGAGAGTTCAAATCTATCTAAGGCAACAAAAACAGTGCTAACATCTGCAAATGCATTAGATGAGAATAACTTCGCAAACCCAAAAAAGATAGTACCAAAGCGAAGTCCACTTGAGAGTCCTGGCAAGGAGATAAATGTCATACTTCCTCCAATTTCATTGACAGTATTTGATTTATTAAAAACTCAATGA 3876 0.3942 MAFCSHKTLFGIMLYSIVIHFLALQHCCADANSTLVVNASNNARKIPNTFHGVFVEEINHAGAGGLWAELVSNRGFEAGAENNIFYPWTIIGNEASISVSISRSSCFDRNKAALIMEVYCGGHKPCPFGGVGISNPGYWGMNIEQGKWYKVVYHVKSEGKFDFQLSFTGVDVKKVASHITHVHGHGKWKRVETIVEAKATNHISSLQITTTRKGSYLLDQVSVMPLDTYKGHGFRKDLFQMVADLKPKFLRFPGGCYVEGAYLKDQFQWKDTIGPWEERPGHHDMWGYWSDDGFGFLEYLQLAEDLGAMPIWVFNAGISLNDGVNKSAIAPYVQDALDGIQFARGSPTSPWGSARAALGHPKPFDLRYVAVGNENCGQPDYEGNYLYFYEAIRSAYPDIQIISNCDASTSPLNHPSDLFDFHIYTDSNDIFSKSSHFDHTPRTGPKAFVSEYAVTKRDAGNGSLLAAVAEAAFLIGLEKNSDIVEMVSYAPLFLNINDRRWIPDAIVFNSYQVYGTPSYWVQKLFSESSGATFLDSTLNTKSNKLIASAIIWQNSMDKKNYLRIKVVNFETTSESLTIFINGLNLNVQQYGSTKTVFASNNVMDENSFLEPKKVVPQTSSLVNADKDLNVILSPYSVTSLDFFLRLYLILVACLVFQRCAYANHTSTLVVDASGSSGRPIPETLFGIFFEEINHAGAGGLWAELVNNRGFEAGGTRVPSNIEPWTIVGQESEIFIETQRSSCFEHNKVALKMDVLCDNCHDGVGISNPGFWGMNIVQGKKYKVVFFVRSKAPIDMKVSFRKTEGGGILASSNIKASASEVSKWKRMETTLVADASSSKSSLYLTTTKKGVIWLDQVSAMPLDTFKGHGFRSDLVNMLLVLKPAFFRFPGGCFIEGQTLRNAFRWKDSVGPWEQRPGHFGDVWSYWTDDGLGYFEGLQLAEDIGAKPLWVFNNGISHTDEVDTSVITPFVQDALDGIEFARGTATSTWGSLRASMGHPKPFDLKYVAVGNEDCGKKNYLGMISLSLRNYLAFYKAIKHAYPDIQIISNCDASAKPLDHPADLYDYHTYLHEYQHMFNNAHAFDKTPRDGPKAFVSEYALIGDKEAKLGTLLGAVSEAGFLIGLERNSDHVIMASYAPLFVNANDRKWNPDAIVFNSDQAYGTPSYWVQFMFKESNGATFLKSQLRTPDPNSVVASAILWENSHNKRSYLRIKVANVGDYQVNLNILLDGIESSNLSKATKTVLTSANALDENNFANPKKIVPKRSPLESPGKEINVILPPISLTVFDLLKTQ 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00524 1291 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 643 1289 - -
Cca07g00524 1291 SUPERFAMILY (Trans)glycosidases 206 533 IPR017853 -
Cca07g00524 1291 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 643 1289 - -
Cca07g00524 1291 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 12 643 - -
Cca07g00524 1291 Pfam Alpha-L-arabinofuranosidase C-terminal domain 451 636 IPR010720 GO:0046373|GO:0046556
Cca07g00524 1291 Gene3D - 67 221 - -
Cca07g00524 1291 Gene3D - 701 853 - -
Cca07g00524 1291 Gene3D - 1172 1288 IPR013780 -
Cca07g00524 1291 Pfam Alpha-L-arabinofuranosidase C-terminal domain 1095 1281 IPR010720 GO:0046373|GO:0046556
Cca07g00524 1291 Gene3D - 526 642 IPR013780 -
Cca07g00524 1291 Gene3D Glycosidases 854 1171 - -
Cca07g00524 1291 Gene3D Glycosidases 222 525 - -
Cca07g00524 1291 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 12 643 - -
Cca07g00524 1291 SMART alpha_l_af_c 1094 1281 IPR010720 GO:0046373|GO:0046556
Cca07g00524 1291 SMART alpha_l_af_c 450 636 IPR010720 GO:0046373|GO:0046556
Cca07g00524 1291 SUPERFAMILY (Trans)glycosidases 838 1178 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00524 Cca-Chr7 7446584 7459621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00524 34 643 Glycoside Hydrolase AT3G10740 60.518 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00524 K01209 - gmx:100780771 1092.8