Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00521 ATGGCTTCCTTCCCTCCTCCTGGTTCACTCACTCTCTGTGAAGTCAATCGTGACCTAATCACCGTCGACGCTCTCTCCGACGATCGAGCCAACCAAACCTACGGAAAAATTCTCGGATTGGTGTTCAGTCCCGTCCCGTTTCACCCTCCCGAGAACGACGCATCCGATCAGGAGGGACCAACCACCACCACGGCCACCGCCGCCGGAGAAACCGTTCCGAGGAAAGGTCCGGTCGCATTCTTGCAAGGCCTTCTAAACAGCTCTCTCGGTCGCCTCTTTTACCCTAACGATGTGCATTTGTTGCCGGAGGTTGATCTCCAAGGAGTAAGCTGGCACCCCATTAAGCATATTATTGCTTTTATCGCTGGCCCAACGCAAGTTTTGGTTCATGATTACCAAGAATCTGAGGGGAAAGATCCGAGTATTTTGACAAATGAGTCACAGAGGGATGTTAGAGTGCTGGAGTGGAGGCCTAATGGTGGGAAAATGCTCGCTGTGGGTTGCAAGAGTGGAATTTGCATATGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGTGCTGCTTCCTTTTTAGGAAGTTTATCAAGAAACTCAGGGAATCGCTATATCTTGGTTGACTTTCTTCGTAGTTCATATGACTGTCTATTTTTCACATACTTAGCAACTGCTTCATATGAAAGCTCCTCGTTCACTGTGTGGGATTATGCTCAAGGTGAGGGGACTCCCATTCGACGTGGATTAGGAGGCATATCATTACTGAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCATCAACTAGCGGTTTTGTAAAGGGTGCAACATGGGATCCAGATGGGCGTATGATACTTCTTGCATTTTCTGAATCGTCAACTTTGGGATCTGTTCACTTTGCATCAAAGCCTCCCTCACTAGATGCACATTTGTTACCTGTTGATTTGCCAGAAATATTATCGTTGACAGGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGCTATGTACAGAGGTCTGATTGCCGTATATGATACAAGAAGGACTCCTCTTATATCCACGTCATTAATTGGATTTATAAGAGGACCTGGAGACAATGCAAAGCCAATTTCATTTTCATTTCACGGGAAGTTTAAGCAGGGACCATTGCTTTCTGTGTGCTGGAGCAGTGGGTTTTGTTGCACTTACCCCCTCTTATTTCGCTCTCACATGCTTCCATAA 1326 0.4593 MASFPPPGSLTLCEVNRDLITVDALSDDRANQTYGKILGLVFSPVPFHPPENDASDQEGPTTTTATAAGETVPRKGPVAFLQGLLNSSLGRLFYPNDVHLLPEVDLQGVSWHPIKHIIAFIAGPTQVLVHDYQESEGKDPSILTNESQRDVRVLEWRPNGGKMLAVGCKSGICIWAASYPGNAASVRSGAASFLGSLSRNSGNRYILVDFLRSSYDCLFFTYLATASYESSSFTVWDYAQGEGTPIRRGLGGISLLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSVHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDAMYRGLIAVYDTRRTPLISTSLIGFIRGPGDNAKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00521 441 Gene3D - 97 208 IPR015943 GO:0005515
Cca07g00521 441 SUPERFAMILY WD40 repeat-like 108 429 IPR036322 GO:0005515
Cca07g00521 441 SMART WD40_4 242 278 IPR001680 GO:0005515
Cca07g00521 441 SMART WD40_4 336 380 IPR001680 GO:0005515
Cca07g00521 441 SMART WD40_4 136 176 IPR001680 GO:0005515
Cca07g00521 441 MobiDBLite consensus disorder prediction 55 69 - -
Cca07g00521 441 Gene3D - 209 433 IPR015943 GO:0005515
Cca07g00521 441 MobiDBLite consensus disorder prediction 48 71 - -
Cca07g00521 441 PANTHER ALADIN/ADRACALIN/AAAS 1 440 IPR045139 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00521 K14320 - gmx:100808599 820.076