Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00518 ATGCCATCGTCACAGAACATAGCCGCCATTGACTCATGGTTGCCGCGTCCCACACTCACCGATTCATGGCTCGCCGACTATTTCTCTCGCGACACCGACGCCCTAACAAAGGCTCTTCACAAGTCCATAAACGCTGATGAGACTAACGCTGCTTACTTTCTCAACGCCGCCGCCGCCACGCCCACCGTTTCCTCGCTCTCGGGCTCCGACCAGGAGTCGCTGCCGAAGCGCCGGGCGCCGCCGCCGCCAACCGGGAAGGTCTCCAAGCGCAAGTCCCGAGCCTCGAAGCGCTCCCAGACCACCTTCATCACGGCGGACCCCGCCAACTTCCGGCAGATGGTGCAGCAGGCGGTAGGTGGtgggcctgggcctgggcctgggcctggTGCTGGGCTTTCGGGGGCGGGTCCACTCCCTTTGGCCCCAGCTCTAGAGGGTGCAGCTTCCTTTGGTTCTTCTGCAGATTTTGACATTTTCTCCCACTTTCCTACTCTGGAGTCGTGGAAAGTGTTGTGA 516 0.5736 MPSSQNIAAIDSWLPRPTLTDSWLADYFSRDTDALTKALHKSINADETNAAYFLNAAAATPTVSSLSGSDQESLPKRRAPPPPTGKVSKRKSRASKRSQTTFITADPANFRQMVQQAVGGGPGPGPGPGAGLSGAGPLPLAPALEGAASFGSSADFDIFSHFPTLESWKVL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00518 171 PANTHER VQ MOTIF-CONTAINING PROTEIN 4 120 IPR039609 -
Cca07g00518 171 MobiDBLite consensus disorder prediction 97 111 - -
Cca07g00518 171 PANTHER CALMODULIN-BINDING PROTEIN 25 4 120 - -
Cca07g00518 171 MobiDBLite consensus disorder prediction 64 138 - -
Cca07g00518 171 Pfam VQ motif 97 116 IPR008889 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00518 - - gmx:100790912 156.762