Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00517 ATGACTGCTCAGACCCAAGAGGAGCTTCTTGCCACACACCTCGAACAACAGAAGATCCACCATGATGAGCCTGTAGTCgaggatgatgatgatgatgaggaagaagatgatgatgactacgacgatgaagaggatgatgaCCATGCCGAAGGACTAGAAGGTGATGCATCTGGTAGGTCGAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAGACCTGTCACTGGTGTCAGCCGAGTGACAGTCAAGAAGAGCAAGAATATCCTGTTTGTTATCTCAAAACCAGACGTTTTCAATTCAAGGCTCCTAATACAAGCAATGTGGGATTGA 351 0.3846 MTAQTQEELLATHLEQQKIHHDEPVVEDDDDDEEEDDDDYDDEEDDDHAEGLEGDASGRSKQTRSEKKSRKAMLKLGMRPVTGVSRVTVKKSKNILFVISKPDVFNSRLLIQAMWD 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00517 116 MobiDBLite consensus disorder prediction 52 73 - -
Cca07g00517 116 Pfam NAC domain 66 107 IPR002715 -
Cca07g00517 116 Gene3D - 72 109 IPR038187 -
Cca07g00517 116 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 1 107 IPR016641 GO:0005854
Cca07g00517 116 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 1 107 - -
Cca07g00517 116 SMART NAC_2 66 114 IPR002715 -
Cca07g00517 116 MobiDBLite consensus disorder prediction 1 76 - -
Cca07g00517 116 MobiDBLite consensus disorder prediction 26 51 - -
Cca07g00517 116 ProSiteProfiles NAC A/B domain profile. 63 116 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00517 Cca-Chr7 7317058 7319938 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00517 K03626 - gmx:100791967 151.369