Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00514 ATGGTGAATCCGGGTTTGTTTTCTGGGAATAAGTCTGTGAATTCGGTGAAGGTAAGCTTTAGGATACCATATTTTACCCAGTGGGGTCAGAGCTTGCTGGTGTGTGGCTCTGTACCAGTGCTTGGTTCTTGGAATGTGAAGAGGGGTGTGCTGCTCAGCCCCATACAACAAGGGGCTGAGCTCGTCTGGGGTGGAAGCATCACAGTGCCAAGAGGGTTCCAATGCCAGTACACTTACTATGTTGTTGATGACAACAAAAATGTGCTGAGATGGGAGATGGGGAAGAAGCGGGAACTGATACTGCCTGAAGGGATTCAGAGTGGCCAGGAGATTGAGTTCCATGATCTTTGGCAGACTGGCTCAGATTGCCTCCCTTTCAGAAGTGCTTTCAGAGATGTCATTTTTCGGCAAAGCTGGGATTTGAGCGATGCAACTGTAGGAGTCAACCACATTAATGTTGAACCACAAGGAGAATCTATCATAGTCCAATTCAAAATTTCCTGCCCAAATATTGAGAAAGGAACATCAATATATGTCATTGGTAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAATGGACTAAAACTCAGCTATTTTGGTGAATCTGTCTGGAAAGCTGAATGTGTGCTACAAAGGAGCGATTTTCCAATAAGATACAGATATGGCAAATATGACAAGAGTGGGAACTTTTCTATAGAGAATGGTCCAAATCGAGAAGTCTCTTCTAACTCTTCAAGAATTGAGGCAAAATATATTTTTCTTTCAGATGGCATGATGCGGGAAACACCATGGCGTGGTGCTGGTGTTGCGATCCCCATGTTTTCTATTAGGTCGGAATCTGATCTGGGTGTTGGAGAGTTTCTTGATCTTAAGTTATTAGTTGACTGGGCTGTAGAATCTGGTTTCCATTTAGTTCAACTTTTACCAATCAATGATACATCCGTACATAGGATGTGGTGGGATTCTTATCCATACAGTTCACTCTCAGTCTTTGCATTGCATCCATTGTACCTGAGAGTACAGGCACTTTCTAAGAACATACCAGAGGAGATCAAGAAAGAGATTGAAAAGGCAAAGCAGCAGTTGGATGGGAAGGATGTTGATTATGAAGCTACAATGGCTACCAAACTCTCGATTGCTAAGAAAGTTTTCACTCAAGAGAAAGATTTGATACTTAATTCAAGTTCCTTTCAGGAGTTCTTTTCTGAGAATGAGGGTTGGTTGAAACCCTATGCTGCTTACTGTTTCCTGCGAGACTTTTTTGAAACATCAGATCGCACTCAATGGGGTCGTTTTGCTCATTATTCGGAAGATAAGCTAGAGAAACTTGTATCCAAGGACAGCCTGCATTATGAGATAATTTGCTTCCACTACTATGTTCAATACCATTTACATTTACAATTATCAGAAGCTGCAGAGTATGCAAGAAATAAGGGAGTGATACTAAAGGGAGATCTTCCAATTGGAGTTGACAGAAACAGTGTGGATACCTGGGTTTATCCAACTTTGTTCCGAATGAATACCTCTACTGGGGCACCTCCAGATTATTTTGATAAAAATGGCCAGAATTGGGGTTTCCCTACTTATAATTGGGAAGAAATGTCAAAGGACAACTATGGTTGGTGGCGGGCTCGATTGACACAGATGGCAAAATATTTTACAGCTTACAGGATTGATCACATATTGGGATTCTTCCGAATCTGGGAACTTCCAGATCATGCTGCGACAGGTCTAGTTGGAAAATTCCGACCATCTATTCCTCTTAGTCAGGAAGAACTTGAAAGAGAAGGAATATGGGACTTTAATCGCCTGAGTCGCCCATATATTAAGCGGGAACTATTACAGGAGAAATTTGGAGCTGCTTGGACTTATGTTGCAACAACTTTTCTAAATGAATTGGACAAGAACTTCTATGAGTTCAAGGAGGATAGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTGCAGAAAGTTCTCTTTTGTTGGAGAGTGAAGACAAATTGCGGCGCAATCTCTTTGATCTTTCACAGAATATAGTTCTAATCCGAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTCCAGGATTTGGATGATCATAGCAAGAACGTTCTCAAAAGATTATACAATGACTACTATTTCTGTCGACAAGAGAATCTTTGGAGGCAAAATGCATTGAAGACCCTGCCGGTGCTTCTGAATTCATCAGACATGCTGGCCTGTGGGGAAGATTTGGGCCTCATTCCATCTTGTGTCCATCCTGTTATGCAAGAGCTGGGGTTAGTTGGGTTGCGCATTCAGCGAATGCCTAATGAACCTGATCTGGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTATGTGCCCCATCATGCCATGACTGTTCCACCTTGCGTGCTTGGTGGGAAGAAGATGAAGACAGAAGACTTCGGTTTTTCAAGAATGTGATGGAGTCCGATGAGTTGCCGCCTGATCAATGTGTTCCAGAAGTTGTACATTTTGTAATAAGGCAGCATTTTGAAGCCCCATCAATGTGGGCAATTTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAATATACAACACGCCCTGCAACAGAGGAGACAATCAATGACCCTACGAATCCGAAGCACTATTGGAGATATCGTGTGCATGTGACTTTGGAATCATTGATCAAGGATAATGAGCTCCAAACCATCATCAAAGATCTTGTGCGTTGGAGTGGAAGATCACTCCCTAAGGAAGACTCAGAAATAGAAGCAAGCCGAGTGTCAGCATTGTCAGTCACAGAAGCTGTTTCTGGTAAACAGAAGTCTGCCAGTACCACGGAAAAGCCTGTTCTTAAAAAATAA 2895 0.4218 MVNPGLFSGNKSVNSVKVSFRIPYFTQWGQSLLVCGSVPVLGSWNVKRGVLLSPIQQGAELVWGGSITVPRGFQCQYTYYVVDDNKNVLRWEMGKKRELILPEGIQSGQEIEFHDLWQTGSDCLPFRSAFRDVIFRQSWDLSDATVGVNHINVEPQGESIIVQFKISCPNIEKGTSIYVIGSNTKLGQWKVENGLKLSYFGESVWKAECVLQRSDFPIRYRYGKYDKSGNFSIENGPNREVSSNSSRIEAKYIFLSDGMMRETPWRGAGVAIPMFSIRSESDLGVGEFLDLKLLVDWAVESGFHLVQLLPINDTSVHRMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKKEIEKAKQQLDGKDVDYEATMATKLSIAKKVFTQEKDLILNSSSFQEFFSENEGWLKPYAAYCFLRDFFETSDRTQWGRFAHYSEDKLEKLVSKDSLHYEIICFHYYVQYHLHLQLSEAAEYARNKGVILKGDLPIGVDRNSVDTWVYPTLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIKRELLQEKFGAAWTYVATTFLNELDKNFYEFKEDSNTEKKIASKLKTCAESSLLLESEDKLRRNLFDLSQNIVLIRDPEDPRKFYPRFNLEDTSSFQDLDDHSKNVLKRLYNDYYFCRQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPDLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRFFKNVMESDELPPDQCVPEVVHFVIRQHFEAPSMWAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHVTLESLIKDNELQTIIKDLVRWSGRSLPKEDSEIEASRVSALSVTEAVSGKQKSASTTEKPVLKK 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00514 964 SUPERFAMILY (Trans)glycosidases 265 918 IPR017853 -
Cca07g00514 964 Gene3D Immunoglobulins 8 119 IPR013783 -
Cca07g00514 964 Gene3D Immunoglobulins 153 254 IPR013783 -
Cca07g00514 964 Pfam Starch binding domain 160 246 IPR002044 GO:2001070
Cca07g00514 964 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Cca07g00514 964 SMART CBM_20_2 159 253 IPR002044 GO:2001070
Cca07g00514 964 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Cca07g00514 964 Pfam 4-alpha-glucanotransferase 272 900 IPR003385 GO:0004134|GO:0005975
Cca07g00514 964 SUPERFAMILY Starch-binding domain-like 157 247 IPR013784 GO:0030246
Cca07g00514 964 Gene3D Glycosidases 721 924 - -
Cca07g00514 964 CDD CBM20_DPE2_repeat2 161 258 IPR034841 GO:2001070
Cca07g00514 964 SUPERFAMILY Starch-binding domain-like 14 117 IPR013784 GO:0030246
Cca07g00514 964 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 154 267 IPR002044 GO:2001070
Cca07g00514 964 PANTHER - 11 925 - -
Cca07g00514 964 Gene3D Glycosidases 265 599 - -
Cca07g00514 964 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Cca07g00514 964 MobiDBLite consensus disorder prediction 945 964 - -
Cca07g00514 964 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00514 Cca-Chr7 7261408 7274884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00514 16 942 Glycoside Hydrolase AT2G40840 72.473 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00514 K00705 - gmx:100793021 1845.86