Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00513 ATGAGATTGTTCAAGATGGCTGTGACCATTGACCGACATAATGGATTCAAGCCATTTAGCCGATCCCAGAGATGCAAACTGCAATCCTATGGTCACCTTGATCCCAACACTCTTGAACTTAGCCAAACTGGTACATTCTCACACTCCTTTGAACTAGCGTTCCAAGCCGATAATATTCACCGCAGTTTCTCCACTCCATGCCTCCCCCTAAGCACCCTTTTAGGGGAAGAACTCACTTCTCACCACCCAAGGGTTGAGATTGTTCGTGGAAGTGGAGCTCCAGTACATGCTCTAGTTGTGGAGGTTGCCATAGCTATGGCCTCAGGTGTTCAACCTACACCCCTCCCTAGTGGCCTAGGTGGTGCCTATGTTTTCCGGAACCCAAATGGTAACAACATTGCTGTAGCAAAGCCAATAGATGAAGAACCTTTGGCCTTGAACAACCCAAAAGGCTTAGGGGGTCAAATGCTGGGCCAACCTGGCTTAAAGAAATCTATTAGGATTGGTGAAACTGGTATAAGAGAATCAGCTGCTTATCTTCTTGATCATGGAGGCCTTGCTGGTGTGCCTCCAACTGCTTTAGTCAAATTCTCTCATGCTGCATTCTTTGTTACCAACAACAGTGATGCAGCCACAGTTCCTTCTCACAAGCCTAAAATTGCCTCACTCCAACGCTTTGTTGGGCATGGTTTTGATGCAGGAGAGTTAGGCCCTTCTTTCTTCTCAGTTTCTTCAGTCCACCAAATTGGGATCCTAGACATTAGGATTCTGAATCTTGATAGACATGCAGGGAATATGCTTGTGGTGAATCATGACCATAAGAATAGTTTTGTTGATGGAGTCACTGACCTTGTTCCCATTGACCATGGTTTTTGCCTACCTGAGTGGCTGGATGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCCTCCATTCCTTTCTCTGACTCCGAACTCGAGTACATTTCCAAACTTGATCCCTTTAAAGATGCAGAGATTTTGAGAACTAAGCTTCCTTTATTGAGGGAGTGCTCTATTCGTGTTCTTTTTGTTTGCACCATTTTGTTGAAACAAGCTGCTGCTGCTGGCCTTTGTCTTGCTGAAATAGGCCAAATGATGACTAGGAAGTTTCGTGGTGGTGAAGAGTTACCAAGTGAAATGGAAAAAGTTTGCTTGAAAGTCAAGGCTAGCATCATCTTCCCTCGTGAGAATTGCAAAGAAACCGAACAAGGGTCTAAATGTGAAGTTGGTGGCATTTCCTTGGGAGACCTTAACCAAGGAGAATGGGAAGCGTTTTTGGACATTTTTAGTGAGCTTTTGCATGGTGTTTTTGAGGAAAAGAAGGTGCAAAAGCATAAGTTGGAACATCATGGAAGTTACCGAACCTTAGGAAGATAG 1398 0.4464 MRLFKMAVTIDRHNGFKPFSRSQRCKLQSYGHLDPNTLELSQTGTFSHSFELAFQADNIHRSFSTPCLPLSTLLGEELTSHHPRVEIVRGSGAPVHALVVEVAIAMASGVQPTPLPSGLGGAYVFRNPNGNNIAVAKPIDEEPLALNNPKGLGGQMLGQPGLKKSIRIGETGIRESAAYLLDHGGLAGVPPTALVKFSHAAFFVTNNSDAATVPSHKPKIASLQRFVGHGFDAGELGPSFFSVSSVHQIGILDIRILNLDRHAGNMLVVNHDHKNSFVDGVTDLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSDSELEYISKLDPFKDAEILRTKLPLLRECSIRVLFVCTILLKQAAAAGLCLAEIGQMMTRKFRGGEELPSEMEKVCLKVKASIIFPRENCKETEQGSKCEVGGISLGDLNQGEWEAFLDIFSELLHGVFEEKKVQKHKLEHHGSYRTLGR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00513 465 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 109 406 IPR000403 -
Cca07g00513 465 Pfam Phosphatidylinositol 3- and 4-kinase 119 369 IPR000403 -
Cca07g00513 465 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 410 IPR044571 -
Cca07g00513 465 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 414 453 IPR044571 -
Cca07g00513 465 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 410 - -
Cca07g00513 465 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 414 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00513 Cca-Chr7 7257239 7260102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00513 6 399 Acyl Lipid Metabolism Gene Families AT2G40850 61.347 6.99e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00513 - - gmx:100809677 683.33