Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00500 ATGGCAACCTTACCATTCACCTCCTTATGCCCAATCACAGTTTCATCTTCCTCTTCCTCTTCAAGACTCACAGCTTTGCATGCTTTAAGAGCCTCAGCTTCTGAACCTGTTCTCAGCCAGCACACCCCCAGAAGGGAATTCTTGAAGGGTATTGGTTTGCAGGCCCTTCTTCCACTTGTTTTGCTGAGAGAGGCACCCCCCTCACTAGCTAGAGAAGTTGAGGTTGGCTCTTTCCTCCCACCCTCACCCTCTGACCCTTCTTTTGTTCTCTTCAAGGCCTCTCCCAAGGACACTCCAGCCCTTCGAGCAGGAAATGTGCAGCCATACAAGTTTATCCTCCCCCCAACTTGGAAACAGGCTCGTGTAGCAAACATATTATCTGGAAATTACTGCCAGCCTAAATGTGCAGAGCCATGGGTGGAGGTTAAATTTGAAGATGAAAAACAGGGAAAAGTTCAGGTAGTGGCCTCGCCTTTGATACGCCTTACCAACAAACCAAATGCAACAATTGAGGACATTGGGAGCCCAGAAAAAGTGATTGCTTCTCTTGGGCCATTTGTCACTGGAAATACATTGGATCCAGATGAGCTCCTTGAGACTTCAGTTGAAAAGCTTGGTGATCAGACGTACTACAAATATGTGCTTGAAACTCCGTATGCTCTCACAGGCACCCACAATCTTGCAAAAGCCACAGCAAAGGGAAACACTGTTGTTTTGTTTGTGGTTAGTGCCAATGACAAGCAATGGCAAACTTCTGAGGAGACTCTAAAGGCTGTACTCGATTCCTTTGAAGTTTAG 798 0.4674 MATLPFTSLCPITVSSSSSSSRLTALHALRASASEPVLSQHTPRREFLKGIGLQALLPLVLLREAPPSLAREVEVGSFLPPSPSDPSFVLFKASPKDTPALRAGNVQPYKFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGNTLDPDELLETSVEKLGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVVSANDKQWQTSEETLKAVLDSFEV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00500 265 Pfam PsbP 108 265 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Cca07g00500 265 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 86 265 - -
Cca07g00500 265 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 15 265 - -
Cca07g00500 265 SUPERFAMILY Mog1p/PsbP-like 104 265 IPR016123 -
Cca07g00500 265 PANTHER - 15 265 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00500 - - gmx:100813771 438.343