Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00498 ATGGATTCGTCTTGTCTCTCCAACGATTTAGTTTCTGGATTCAAAGACAAGGAGTCAATGGTTGACCCCTTTTTGGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTCACCAttttGCGGATGGAGCTTGACATCCAGAGGTTTATGAATAATGCTGACCAGCAGCATTTTGAATTTCCACATTTCCCCTCTTCCTATCTCCGGCTAGCTGCACATCGTGTTGCTCAACACTACAATATGCAAACAATGGTTCAAGATAATAGCATAGACGGCCAGGGAAGTAAAATTCTGGTGAGAAAGTTACCAGAAAGCAAGTATCCTGTGATTCGATTATCCGAAATACCTGCAAAGCAGTTGGAAAATGATAGATCTGAGCAGAAAAAAATTGTTATTAGACCTAGACCTAATAAAACTAGTTTGAATGAAGGCAACGGTGTTGGGATGAAAGGAAATCCTGTAAGAAGCGTGGAAGAGAGGAAGGAAGAATATGACCGGGCACGGGCACGTATCTTTAGTAGCTCTAGAAGCTTTGACTCAGGTGATACCTCATCCATGGTTCCAGTGGATGGTAGAAATTCTTTTACTAGCAAGGATGAAAGTGAAACTAGCAAGCAACCTGTGGTTGATTCTGAAAGAAACATTAGTGTAAGGGATAATTGTGCTACTCGAGTTGCCATATTCAGGGATAGGGAAAAGGATCGTAGTGATCCAGATTATGACCGTAATTATGGAAGGTATGCTAGGAGTATTCCAACATCTGCTGTTAACATGGTGCCATTTAATTTGCAAAAAGCTCAACCTTCATTTCCTCAGTATGACGCTACATTTAATCAATTGGGTCAGATGTCACAAAATCGAGCCTCTCTTGGCTATGTACCTCCTTCAACCCCGATAATGAGTCCCTTTTGCACCACAGGATTGAATCAGACATCTGGGGATGGTGCTTACCTACAGTGGCCTAGTGCTGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCGCTGAGCTTTGACTATTCACAGAACTATTAG 1068 0.427 MDSSCLSNDLVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRLAAHRVAQHYNMQTMVQDNSIDGQGSKILVRKLPESKYPVIRLSEIPAKQLENDRSEQKKIVIRPRPNKTSLNEGNGVGMKGNPVRSVEERKEEYDRARARIFSSSRSFDSGDTSSMVPVDGRNSFTSKDESETSKQPVVDSERNISVRDNCATRVAIFRDREKDRSDPDYDRNYGRYARSIPTSAVNMVPFNLQKAQPSFPQYDATFNQLGQMSQNRASLGYVPPSTPIMSPFCTTGLNQTSGDGAYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00498 355 PANTHER OS05G0411600 PROTEIN 8 354 - -
Cca07g00498 355 MobiDBLite consensus disorder prediction 175 210 - -
Cca07g00498 355 MobiDBLite consensus disorder prediction 175 193 - -
Cca07g00498 355 Pfam SUZ domain 125 174 IPR024771 -
Cca07g00498 355 CDD R3H_encore_like 34 100 - -
Cca07g00498 355 Gene3D - 13 135 IPR036867 GO:0003676
Cca07g00498 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 8 354 - -
Cca07g00498 355 MobiDBLite consensus disorder prediction 134 160 - -
Cca07g00498 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Cca07g00498 355 Pfam R3H domain 37 87 IPR001374 GO:0003676
Cca07g00498 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Cca07g00498 355 SUPERFAMILY R3H domain 8 124 IPR036867 GO:0003676
Cca07g00498 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00498 Cca-Chr7 6912590 6916409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00498 - - gmx:100796710 625.55