Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00449 ATGATTTCAACTTCAAGCAGTAGCATGGCTTCTTTACTTCCCAAAACGGCACCGCATCTCCTCCCATTCGCAAACCCTTATTCGCCCCTCATCTTACCTTTCCGCTTCCACTCTTTCCCTCGCCCTCCTCTCTCCGCCCTCAGAGCCATTTCTTCCGATGCCGATAATTTGCGCGCCAAGCCCCTCGTTTCTCACGCCTTTgaagacaacaacgacgacgacgacAAATGGGTTGACTGGGAGGACCAGATTCTGGAGGACACCGTTCCCCTCGTTGGCTTCGTCAGGATGCTTCTCCATTCTGGACAATATGAAAATGGAGATAGACTAAGTCCAGAGCACGAGAAAACCATTCTTGAGAAGCTGCTTCCCTTTCATCCAGAGTCTCAGAAAAAGATTGGATGTGGAGTTGATTATATCACGATTGGGTATCATCCTGATTTTGAACGCTCTAGGTGCTTGTTCATAGTACGACAAGATGGAGAGATGGTTGATTTTTCATATTGGAAATGCATAAAAGGCTTGATCAGAAAGAACTATCCATTATATGCAGACAGTTTCATTCTCAGACATTTCAGGAAGAAGAGTCGTAATATGTGA 600 0.4367 MISTSSSSMASLLPKTAPHLLPFANPYSPLILPFRFHSFPRPPLSALRAISSDADNLRAKPLVSHAFEDNNDDDDKWVDWEDQILEDTVPLVGFVRMLLHSGQYENGDRLSPEHEKTILEKLLPFHPESQKKIGCGVDYITIGYHPDFERSRCLFIVRQDGEMVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKSRNM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00449 199 Pfam Protein of unknown function (DUF3223) 97 172 - -
Cca07g00449 199 PANTHER PROTEIN DCL HOMOLOG, CHLOROPLASTIC 65 198 - -
Cca07g00449 199 Gene3D - 86 175 - -
Cca07g00449 199 PANTHER - 65 198 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00449 Cca-Chr7 5930429 5936820 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00449 - - ccaj:109802939 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00449 07 5930429 5936820 Cca07g00449 07 5930429 5936820 ECH