Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00444 ATGGGTGCCTCTCACAGCCGCGAAGATCTGTTAGAGTCTTCCGATTCGGAACAAGAGCAAGAAGAAGCCTACGAAGACGCCACCGAAGGAAGCTCCGAACGCCATCCCAAAACCCCGTCGTCATCCCTCGATGACGTGGAGGCCAAACTCAAAGCCCTGAAACTCAAATACTCCACTTCCTCCTCCTCCTCAAGCCTCGCCGTCAAACTCTACCTCCACGTCGGCGGCAACACCCCCAAGGCCAAATGGGTAACCTCCGACAAATTCACCACTTACTCATTCATCAAAacccactccgaaaccgacaccgacgaagaaaacgactccgacTCTGGCCACGACGAGCAACCTTTCTGGGTTCTCAAAGTGGGCTCCAAAGTCCGCTCCTTGGTGGGCCCCGAGATGGGCCTGAAGAGCTTCCCCGACCAGCGGCGCGTGGACTTCGTGGCGCGTGGCGTCTGGGCGATGAAGTTCTTCACGGAACATGACCACGCCGAGTTCATGAAGTCCTACGAGAAGTGTCTGTTCGAGAACACGCACGGCGTGGAGGCGACGGAGGAGAACAAGCTTAAAATCTACGGCAAGGATTTCATCGTGTGGGCGAAGCCCGAGGCCGCGGATGATTCCATGTGGGAGGATGCAGAGGAAGCGTTCGCTAAAAGTCCCACACCGGTTAGACAGAGCCAGGACCTGCGTGAAGAGTTCGAAGAAGCTTCCAACGGTGGCATCCAAAGCCTGGCGTTGGGGGCTTTGGATAACAGTTTCTTGGTGGGTGATAATGGGATTCAGGTCGTGAAGAATTTCGCACATGGGATACATGGGAAAGGTGCTTTTGTGAATTTCAGTGATGGGTATCAAAAtggtggtggtggtggtagtgCGTATTGTACCCCTAAGAAGACGCTTCTTATGAGGGCTGAGACCAACATGCTTCTGATGAGTCCAATGGGTGGAGGGAAGCTTCACTCGACGGGGCTTCATCAGCTTGATATTGAGACTGGGAAGGTTGTGAGTGAGTGGAAGTTTGGGAAGGATGGTGCTGAGATTACGATGAGGGATATTACCAATGATAGTAAAGGTGCTCAATTGGATCCTTCTGGATCTACTTTTCTAGGGTTGGATGATAACAGGCTTTGTAGGTGGGATATGAGGGATCGTAATGGGATGGTTCAGAATTTGGCTGACTCTGGGTGCCATGTGAATACACCTGTGTTGAATTGGGCCCAGGGGCATCAGTTTTCAAGGGGGACTAATTTTCAGTGCTTTGCTACTACTGGGGATGGTTCCATTGTTGTGGGGTCCTTGGATGGGAAGATAAGGCTGTATTCGGTGAGCACGATGAGGCTGGCGAAGACGGCGTTTCCTGGTCTTGGATCTCCTGTTACTCATGTGGATGTTACCTTCGATGGCAAGTGGATTGTGGGTACTACTGATACCTACTTGATTCTTATTTGTACCCTCTTTACTGACAAAGATGGAAGGACCAAGACTGGTTTTTCCGGACGGATGGGGAATAAGATCGCTGCTCCCAGGTTGCTGAAGCTCACCCCTCTTGATTCGCATTTGGCTGGAGGGAATAACAAGTTCCGCAATGCTCAGTTTTCGTGGGTGACAGAGAATGGGAAACAGGAGCGACATATAGTAGCCACTGTGGGGAAGTTCAGCGTGATATGGAACTTCCAACAAGTCAAGGATGGTTCTCATGAGTGCTACCGTAACCAACAGGGTCTAAAGAGCTGCTACTGCTACAAGATAGTCCTCAGAGATGATTCAATTGTTGAGAGCCGTTTTATGCATGACAAGTTTGCTGTCACCGACTCCCCTGAGGCTCCATTGGTAATAGCCACCCCAATGAAAGTTAGCTCATTCAGCATATCCAGCAAACGATGA 1890 0.491 MGASHSREDLLESSDSEQEQEEAYEDATEGSSERHPKTPSSSLDDVEAKLKALKLKYSTSSSSSSLAVKLYLHVGGNTPKAKWVTSDKFTTYSFIKTHSETDTDEENDSDSGHDEQPFWVLKVGSKVRSLVGPEMGLKSFPDQRRVDFVARGVWAMKFFTEHDHAEFMKSYEKCLFENTHGVEATEENKLKIYGKDFIVWAKPEAADDSMWEDAEEAFAKSPTPVRQSQDLREEFEEASNGGIQSLALGALDNSFLVGDNGIQVVKNFAHGIHGKGAFVNFSDGYQNGGGGGSAYCTPKKTLLMRAETNMLLMSPMGGGKLHSTGLHQLDIETGKVVSEWKFGKDGAEITMRDITNDSKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLADSGCHVNTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSVSTMRLAKTAFPGLGSPVTHVDVTFDGKWIVGTTDTYLILICTLFTDKDGRTKTGFSGRMGNKIAAPRLLKLTPLDSHLAGGNNKFRNAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCYCYKIVLRDDSIVESRFMHDKFAVTDSPEAPLVIATPMKVSSFSISSKR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00444 629 MobiDBLite consensus disorder prediction 27 45 - -
Cca07g00444 629 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 629 IPR040458 -
Cca07g00444 629 PANTHER DEM PROTEIN 1 629 - -
Cca07g00444 629 Gene3D - 306 564 IPR015943 GO:0005515
Cca07g00444 629 Pfam VID27 C-terminal WD40-like domain 247 572 IPR013863 -
Cca07g00444 629 SUPERFAMILY Putative isomerase YbhE 297 527 - -
Cca07g00444 629 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00444 Cca-Chr7 5866822 5870142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00444 1 629 Acyl Lipid Metabolism Gene Families AT3G19240 63.415 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00444 - - gmx:100810233 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00444 07 5866822 5870142 Cca07g00444 07 5866822 5870142 ECH