Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00440 ATGGAGTCTCGCGGACACTCGAACCCGCTTCTGTCATTTTCCACCTTCATCCATCAACACTGCGTCCGTCTCGCGACTCGTTTGGATGACACCAAGCGAGCCCTAGCCCAGGCTCATCACAATCTTCTATCCCCCAAACACGCCCTCGCCGCCACTGCTACTTTGGGTTCCCACCACGTCGCTAAGTCCCTCGCCGGCACCTCCGTTTACACCGTCAGCAATTCCAACAATGAGTTCGTTCTTATTTCCAACGCCGACGGCGCCAAGTCCATCGGATTGCTTTGCTTTCGCCAAGAGGACGCCGAAGCCTTCCTCGCTCAGGTTCGATCACGGAGAGGAGAACTTCGAGGCAAGGCTAGGGTTGTTCCAATTACTCTCGACCAGGTTTACATGTTGAAGGTTGAAGGCATTGCATTCCGATTCTTACCCGATCCAGTTCAAATAAAGAACGCTTTGGAGCTCAAACCAGCCAACAAAGGAGGTTTTGACGGAGTTCCTGTTTTTCAGTCAGAACTTTTGGTTGTGAAGAAGAAGAATAAGCGTTACTGCCCTGTGTATTTCTCAAAGGAGGATATCGAGCAGGAACTGTCCAAAGTTTCCAAGGCATCTAGAGGACCTGGTGTCTCTCAGCATATAGCGGTTGGTAGCTTGGAAGATGTACTGAAAAAAATGGAGATGAGTGAAAGGAGTTCAGGATGGGAGGATTTGATTTTTATTCCACCAGGGAAAAGTCACTCTCAACACATAAAAGAAATTAATGAATGA 765 0.4876 MESRGHSNPLLSFSTFIHQHCVRLATRLDDTKRALAQAHHNLLSPKHALAATATLGSHHVAKSLAGTSVYTVSNSNNEFVLISNADGAKSIGLLCFRQEDAEAFLAQVRSRRGELRGKARVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKPANKGGFDGVPVFQSELLVVKKKNKRYCPVYFSKEDIEQELSKVSKASRGPGVSQHIAVGSLEDVLKKMEMSERSSGWEDLIFIPPGKSHSQHIKEINE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00440 254 Gene3D - 143 227 - -
Cca07g00440 254 Gene3D - 65 142 - -
Cca07g00440 254 Pfam Tic22-like family 10 251 IPR007378 GO:0015031
Cca07g00440 254 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 7 252 IPR007378 GO:0015031
Cca07g00440 254 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 7 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00440 Cca-Chr7 5838365 5842235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00440 - - gmx:100802935 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00440 07 5838365 5842235 Cca07g00440 07 5838365 5842235 ECH