Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00433 ATGAAGGTATTGGTGACCGGTGCGTCCGGTTACCTCGGCGGAAGACTCTGCGACGCTCTGCTCCGCCGAGGCCATTCCGTGAGGGCCCTCGTTAGGTCCACCAGCGATATCTCCGCTCTTTCTTCGCACATCGAAATCTTCTACGGCGACGTCACCGACTACGcctctctcctcgccgcattctcctcctgctccgtcgtcttccacctcGCCGCCCTCGTCGAACCTTGGCTCCCCGACCCCTCCAAATTCTTCTCCGTTAACGTCGGGGGATTGAAAAACGTGTTGGCGGCGGTCAAGGAGACTCGCACGGTGGAGAAACTCGTCTATACGTCGTCGTTTTTCGCTCTAGGACCGACTGATGAAGGCATAGCGGATGAGAATCAGGTTCATCATGAGAAGTTTTTCTGTACGGAGTATGAGAAATCGAAGGTAGCTGCCGATAAGATTGCGTTGCAAGCTGCGTCGGAGGGTGTGCCGATAGTGTTGCTGTATCCCGGAGTAATCTACGGGCCTGGTAAGGTTACTGCAGGAAACGTTGTTGCGCGAATGATAGTGGAACGGTTTAGTGGTAGATTGCCTGGTTACATAGGGTATGGGAGTGACAAGTTTTCGTTCAGCCATGTGGAGGATGTGGTGGAGGGGCACATTGCAGCAATAGAGAAAGGAGAAGGTGGGAATAGGTATCTACTAACGGGGGAAAATGCGTCGTTCAATCATGTTTTTGATATGGCTGCTGTGATTACTAATACGAAGAGACCAGTGCTTAACATCCCTTTGTGGCTAATTGAAGCCTATGGCTGGCTCTTGGTTTTCTTCGCTAGAATCACTGGAAAGCTACCTCTCATCAGTCCACCGACTGTACATGTTTTGAGACATCGGTGGGAGTATTCGTGCGACAAAGCTAAAAGGGAGCTGGATTATAGGCCCAGAAGCCTGAAAGAAGGTCTTGTGGAGGTACTTCTCTGGTTGAAGAACTCGGGCTTGATAACATACTCATGA 1002 0.484 MKVLVTGASGYLGGRLCDALLRRGHSVRALVRSTSDISALSSHIEIFYGDVTDYASLLAAFSSCSVVFHLAALVEPWLPDPSKFFSVNVGGLKNVLAAVKETRTVEKLVYTSSFFALGPTDEGIADENQVHHEKFFCTEYEKSKVAADKIALQAASEGVPIVLLYPGVIYGPGKVTAGNVVARMIVERFSGRLPGYIGYGSDKFSFSHVEDVVEGHIAAIEKGEGGNRYLLTGENASFNHVFDMAAVITNTKRPVLNIPLWLIEAYGWLLVFFARITGKLPLISPPTVHVLRHRWEYSCDKAKRELDYRPRSLKEGLVEVLLWLKNSGLITYS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00433 333 Gene3D - 1 331 - -
Cca07g00433 333 Pfam NAD dependent epimerase/dehydratase family 3 229 IPR001509 -
Cca07g00433 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 332 - -
Cca07g00433 333 CDD AR_FR_like_1_SDR_e 3 324 - -
Cca07g00433 333 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 332 - -
Cca07g00433 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 326 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00433 Cca-Chr7 5749293 5751125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00433 3 241 Miscellaneous Gene Families AT1G09510 30.651 2.25e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00433 K15891 - gmx:100792747 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00433 07 5749293 5751125 Cca07g00433 07 5749293 5751125 ECH