Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00425 ATGGCCCAGTTTtctctctcccctctctcctgtccctgtgcacctcctcctcttccacttcgccgccctttctttctctctcctcACCGAGCCGCCGCCACCGACGCCGTTTGCACGTCCACTTCCTCCTCCGTTTCCAATTACGCGCCCAAAGTCGTCGTCACCAGAGAGCGCGGCAAGAACGCCAAGCTTATCGCTGCTCTGGTTAAACATGAAATCAATTGTTTGGAGCTTCCACTCATTGAGCACACGCGGGGACCTGATTTAGACAGGCTTCCTTCTGTATTAGGTGACAATGCATTTGATTGGGTTGTCATAACTTCTCCTGAGGCAGGTTCAGTCTTTCTAGAGGCATGGAGAGCTTCCGGGATGCCTCATGTCAAAATAGGTGTTGTTGGGGCTGGTACTGTAAGTATTTTCAAGGAAGCTTTGCAGTCTTCAAACCAATCCCTTGACATTGCCTTCGTGCCATCAAGAGCAACAGGAAAGGTTTTTGCTACAGAGCTTCCTAAGATTGGAAATAAATGCACTGTTCTGTATCCTGCTTCTGCAAAGGCTAGCAATGAGATTGAGGAAGGACTTTCAAATCGTGGATTTGAGGTTACTAGGATGAATACATATACAACGGTGCCGGTTCAACACGTTGACCAAATGGTTCTAAAGCTAGCACTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTTCTATACGTGCCTGGAAGAATCTTCTTTCAGATTCAGAGTGGAACAATTCTGTTGCATGCATTGGTGAGACAACTGCTACAATGGCAAGAAGTTTAGGATTCGCAAATGTGTACCACCCAAAACAACCAGGCATCGAAGGCTGGGTAGAAAGTATTCTTGAAGCATTAGGTTCCTATGATGAATTATTGAGGTAG 900 0.4244 MAQFSLSPLSCPCAPPPLPLRRPFFLSPHRAAATDAVCTSTSSSVSNYAPKVVVTRERGKNAKLIAALVKHEINCLELPLIEHTRGPDLDRLPSVLGDNAFDWVVITSPEAGSVFLEAWRASGMPHVKIGVVGAGTVSIFKEALQSSNQSLDIAFVPSRATGKVFATELPKIGNKCTVLYPASAKASNEIEEGLSNRGFEVTRMNTYTTVPVQHVDQMVLKLALAAPVVTVASPSSIRAWKNLLSDSEWNNSVACIGETTATMARSLGFANVYHPKQPGIEGWVESILEALGSYDELLR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00425 299 Pfam Uroporphyrinogen-III synthase HemD 64 285 IPR003754 GO:0004852|GO:0033014
Cca07g00425 299 Gene3D - 96 201 IPR036108 GO:0004852|GO:0033014
Cca07g00425 299 CDD HemD 52 287 IPR003754 GO:0004852|GO:0033014
Cca07g00425 299 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 20 294 IPR039793 GO:0004852|GO:0006780
Cca07g00425 299 Gene3D - 202 291 IPR036108 GO:0004852|GO:0033014
Cca07g00425 299 SUPERFAMILY HemD-like 51 292 IPR036108 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00425 K01719 - gmx:100808086 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00425 07 5628661 5636829 Cca07g00425 07 5628661 5636829 ECH