Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00422 ATGGGACCGGTGCAGTGGATGGAGAACGTGAACCCGGGTTTAGCGTCGCTGCTCCGTCACAGCACGGGGGAGAATAAGAAGCGAAGCGGAGGAGGGGGGCTGTTGAGAATGCTGAAGCTGTTTCCGATGCTGAGTTCGGGGTGCAAAATGGTGGCACTGTTGGGGAGGCCGAGGAAAATGCTGAAGGACAGTGCGACGACGGGTACGATCTTCGGTTACCGGAAGGGGAGGGTGAGTCTGGCCATACAAGAGGACACGCGTGAAATGCCGATATTCCTCATAGAGCTTCCGATGCTGGCGAGCGCCCTGAACAAGGAGATGGGTTCGGACATAGTGAGGATTGCGCTGGAGAGCGAGACGAGGACGAACAAGAAGAAGCTTCTGGAAGAGTTCGTTTGGGGCGTGTACTGCAACGGGAGGAAGGTTGGGTACTCCATCAGGCGGAAGCAGATGAGCGACGATGAGCTCCAGGTGATGCAGCATTTGCGAGGGGTTTCCATGGGAGCTGGGGTGCTCCCCTCCGCTTCTGATCACAAGGAGTGTGATGGGGAAATGACTTACATGAGGGCTCGCTTCCAGAGGGTCCTTGGCTCCAAGGATTCCGAAGCCTTCTATATGATTAACCCTGATACTCATAATACTTCTCATTCTCAAGGCCCCGAGTTCAGTATCTTCTTTCTTAGACCTCACTAA 693 0.5469 MGPVQWMENVNPGLASLLRHSTGENKKRSGGGGLLRMLKLFPMLSSGCKMVALLGRPRKMLKDSATTGTIFGYRKGRVSLAIQEDTREMPIFLIELPMLASALNKEMGSDIVRIALESETRTNKKKLLEEFVWGVYCNGRKVGYSIRRKQMSDDELQVMQHLRGVSMGAGVLPSASDHKECDGEMTYMRARFQRVLGSKDSEAFYMINPDTHNTSHSQGPEFSIFFLRPH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00422 230 PANTHER OS09G0463600 PROTEIN 11 228 - -
Cca07g00422 230 Pfam Protein of unknown function, DUF617 67 228 IPR006460 GO:0010274
Cca07g00422 230 PANTHER PROTEIN MIZU-KUSSEI 1 11 228 IPR006460 GO:0010274
Cca07g00422 230 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 66 228 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00422 Cca-Chr7 5585803 5587200 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00422 - - gmx:100782262 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00422 07 5585803 5587200 Cca07g00422 07 5585803 5587200 ECH