Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00416 ATGGACCTCCGTGAGTCGATCAGCAACCAAACCGACGTTGCTCTGAGCATCACAAAGCCCTTATTGTCGAAAGAAGGTCGTGAGAAGAACGTGGTGTTTTCGCCGCTGTCGTTGCACGTTGTTCTTAGCATCATCGCCGCTGGTTCCAAGGGCCACACACTCGATCAGCTTCTCTCCTTCCTCCGATCCAAATCCAACGATCATCTCAACTCCTTCGCCTCTCAGCTCGTCGCCGTCGTCCTCTCCGACGCCGCTCCCGCCGGCGGGCCCCGTCTCTCCTTCGCCAACGGCGTGTGGGTTGAGCAATCCCTCTCTCCTCTCCCTTCCTTCAAACAACTTGTCACTACCGATTACAAGGCCACTTTGGCTTCGGTTGATTTCCAGACCAAGGCTGTTGAAGTGGCCAATGAAGTAAATTCATGGGCTGAAAAAGAGACAAATGGCCTTGTTAAAGAGCTTCTTCCTCCTGGATCAGTCGACAATTCAACCAGGCTCATCTTTGCAAATGCACTGTACTTCAAAGGAGCGTGGAATGAGAAGTTTGATCCTTCAACTACGGAAGACAATGATTTTCACCTTCTTGACGATAGTACAGTCAAGGTTCCCTTCATGACGAGCAACAAGAAGCAGTTTATTAGGGCTTTTGATGGTTTCAAAGTCCTTGGTCTTCCCTACAAGCAAGGCGAAGATAAGCGTCAGTTCACCATGTACATTTTCCTCCCAGATGCAAAAGATGGGCTATCGGCTTTGGCCGAGAAATTTGCTTCTGAATCTGGGTTCTTGGAGCGCAAGCTTCCTAATCAAAAAGTGGAAGTAGACGAATTCAGGATCCCAAGATTCAAAATTTCTTTTGGGTTTGAGGCCTCTAATGTGCTGAAGGAGCTGGGAGTGGTTTTGCCTTTCACTGTTGGAGGTTTGACCGAAATGGTGGATTCTTCTGTGGGTCAAAACCTATGTGTTTCTGATATATTTCATAAGTCCTTTATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCGGCCACAGCTGCAACTATACTATTGAGGAGTGTGCAATTTCCAACTAAAATAGACTTCGTAGCAGACCACCCTTTCTTGTTCCTGATCAGAGAAGATTTAACTGGAACGGTGCTCTTCATCGGGCAGGTGCTGAATCCTCATGCTGAATGA 1170 0.4769 MDLRESISNQTDVALSITKPLLSKEGREKNVVFSPLSLHVVLSIIAAGSKGHTLDQLLSFLRSKSNDHLNSFASQLVAVVLSDAAPAGGPRLSFANGVWVEQSLSPLPSFKQLVTTDYKATLASVDFQTKAVEVANEVNSWAEKETNGLVKELLPPGSVDNSTRLIFANALYFKGAWNEKFDPSTTEDNDFHLLDDSTVKVPFMTSNKKQFIRAFDGFKVLGLPYKQGEDKRQFTMYIFLPDAKDGLSALAEKFASESGFLERKLPNQKVEVDEFRIPRFKISFGFEASNVLKELGVVLPFTVGGLTEMVDSSVGQNLCVSDIFHKSFIEVNEEGTEAAAATAATILLRSVQFPTKIDFVADHPFLFLIREDLTGTVLFIGQVLNPHAE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00416 389 CDD serpinP_plants 8 386 - -
Cca07g00416 389 SUPERFAMILY Serpins 6 386 IPR036186 -
Cca07g00416 389 Pfam Serpin (serine protease inhibitor) 9 386 IPR023796 -
Cca07g00416 389 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 15 389 IPR000215 GO:0004867|GO:0005615
Cca07g00416 389 ProSitePatterns Serpins signature. 359 369 IPR023795 -
Cca07g00416 389 SMART serpin2 15 386 IPR023796 -
Cca07g00416 389 PANTHER SERPIN-ZX-LIKE 15 389 - -
Cca07g00416 389 Gene3D - 177 381 IPR042185 -
Cca07g00416 389 Gene3D Antithrombin, subunit I, domain 2 28 333 IPR042178 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00416 K13963 - gmx:100806180 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00416 07 5512115 5515426 Cca07g00416 07 5512115 5515426 ECH