Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00415 ATGGGAATCTGCAGAGATATGATTACACGACCAAGGGTTCAAAGAAGGATAGGAGGAAACAGAGCTGCACTTTTTGTATATGCCATGGAAGGGCTGGAGAACATGGCTTTTGTTGCCAATGCTGTGAGCCTAGTAACTTACTTCTATGGGTACATGAACTTCAGCTTAACAAAATCTGCCACAACACTCACCAACTTTATGGGAACTGCATTTTTACTATCTCTGGTTGGTGGAATAATCAGTGATACCTTCCTCTCTAGGTTCAAGACCTGTGTTCTGTTTGCATGCATGGAATTGCTGGGATATGGTATCCTCACAATTCAAGCATGGTTCCACCAATTAAGACCCATACCCTGCAAAGATGTGGCACCAACCCAGATGAGTCAATGTGAGGCTGCCACGGATGGCCAGGCTGCAATACTTTACACTGGCCTATACCTTGTTGCCTTAGGAACCGGTGGTATTAAGGCAGCTTTACCAGCCTTAGGGGCTGACCAGTTTGATGATAAAGATCCCAAGGAGGCAGCTCAACTCTCTAGCTTTTTCAACTGGTTCTTGTTCAGCCTTACCATTGGAGCAATAGTTGGTGTTACTTTCATTGTTTGGATTGGTGCCAACCTAGGATGGGATTGGAGCTTTATTGTATGCACTGCAACAATTTTATTTGCAATTCTCTTCATATGCATGGGCAAATCATTATACCGAAACAATGTCCCAAAGGGAAGCCCTCTAATTCGAATCATACAGGTGTTTGTGGCAGCTTTCAGAAACAGAAAACTTCAGGTTCCAGATAACACAGACGAACTACATGAGACTCATGAAAAGCAAAGAGGGGACGATTATGAAATCCTTAAAAAGACAGATCAATTCAGATTTTTGGACCGAGCAGCAATTGGTAGAAGCAGCACAGGTGCAGCAAATGGACCCTGGAGACTGTGCACAGTAACACAAGTGGAAGAAACGAAAATCCTAATCCGCATGCTACCAATAATATTTAGCACCATATTCATGAACACATGTTTGGCTCAACTTCAGACTTTCACCATACAACAAAGCACCACAATGAACACCAAAATCGGGGGGTTTAAAGTGCCAGGACCCTCTCTCCCGGTCATCCCTTTGTTGTTCATGTTTGTCCTAATCCCTTTATATGACCGTTTCTTCGTGCCACTTGCTCGAAGAATCACGGGGATTCCCACAGGAATTCGACACCTTCAGAGGATTGGAATTGGATTGGTAATGTCTGCTGTTTCCATGGCAGTGGCTGGTTTTGTGGAAACATGGCGCAAGAATGTGGCCATCCAACACAACATGGTGGATAGCACAGAGCCTTTGCCAATAAGTGTGTTCTGGCTGGGTTTCCAATATGGTATTTTTGGAGCTGCAGACATGTTTACCCTCATTGGACTTTTGGAGTTTTTCTATGCGGAAAGTTCAGCTGGAATGAAGTCACTAGGCACAGCGATCTCGTGGTGTTCCGTGGCATTCGGTTACTATACAAGCACGGTGGTGGTTGAGGTGGTCAACAAAGTGAGTGGAGGCTGGCTGGCTAGTAACAACTTGAATAGAGACAAGCTCAACTACTTCTACTGGATGTTGTCAGTGATCAGCGTTGTAAACTTTGGATTTTACTTGCTTTGTGCTTCTTGGTATAGGTACAAAACGGTGGAAGATGAGCAACATGATTCAAAAGATAACGTTGACATCGCCAAGGTTTAG 1719 0.4421 MGICRDMITRPRVQRRIGGNRAALFVYAMEGLENMAFVANAVSLVTYFYGYMNFSLTKSATTLTNFMGTAFLLSLVGGIISDTFLSRFKTCVLFACMELLGYGILTIQAWFHQLRPIPCKDVAPTQMSQCEAATDGQAAILYTGLYLVALGTGGIKAALPALGADQFDDKDPKEAAQLSSFFNWFLFSLTIGAIVGVTFIVWIGANLGWDWSFIVCTATILFAILFICMGKSLYRNNVPKGSPLIRIIQVFVAAFRNRKLQVPDNTDELHETHEKQRGDDYEILKKTDQFRFLDRAAIGRSSTGAANGPWRLCTVTQVEETKILIRMLPIIFSTIFMNTCLAQLQTFTIQQSTTMNTKIGGFKVPGPSLPVIPLLFMFVLIPLYDRFFVPLARRITGIPTGIRHLQRIGIGLVMSAVSMAVAGFVETWRKNVAIQHNMVDSTEPLPISVFWLGFQYGIFGAADMFTLIGLLEFFYAESSAGMKSLGTAISWCSVAFGYYTSTVVVEVVNKVSGGWLASNNLNRDKLNYFYWMLSVISVVNFGFYLLCASWYRYKTVEDEQHDSKDNVDIAKV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00415 572 PANTHER PEPTIDE/NITRATE TRANSPORTER 12 560 - -
Cca07g00415 572 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 560 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca07g00415 572 SUPERFAMILY MFS general substrate transporter 25 562 IPR036259 -
Cca07g00415 572 Pfam POT family 88 512 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca07g00415 572 Gene3D MFS general substrate transporter like domains 3 560 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00415 Cca-Chr7 5488198 5492133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00415 6 555 Organic Solute Cotransporters AT1G69850 45.280 2.99e-160 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00415 K14638 - gmx:100781215 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00415 07 5488198 5492133 Cca07g00415 07 5488198 5492133 ECH