Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00411 ATGGCCATGGCCACAGCTGGCGTGTGTCCTCAGAACATCACCGGAGCCATCGTGACCAAGAAGCGAATGAAGAAAGTGGTACACGTAAGAGGCCTTAATTCATTCGGGGGATTAAAGGCTAGCAATGGTGTCGTCTCTTTGGGGCTTCCTTTGAGCACTGAGAAGTGCTTCGCTAAGATTGTGAGCTCAGTAAAAGCAACAACATCAAATGGAAAAGGAAAGGGAGGGGCGCTCTCATCCACGTGCAATGCCGCAGGTGAGATATTCAACATCGCTGCTATCATCAACGGTCTTGTCCTTGTCGGGGTTGCGGTTGGTTTTGTCCTCCTGCGAGTTGAAGCATGGGTCGAGGAGTCTGAAGCAGAGTGA 369 0.5095 MAMATAGVCPQNITGAIVTKKRMKKVVHVRGLNSFGGLKASNGVVSLGLPLSTEKCFAKIVSSVKATTSNGKGKGGALSSTCNAAGEIFNIAAIINGLVLVGVAVGFVLLRVEAWVEESEAE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00411 122 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 121 - -
Cca07g00411 122 Pfam PetM family of cytochrome b6f complex subunit 7 86 113 IPR012595 GO:0009512
Cca07g00411 122 Hamap Cytochrome b6-f complex subunit 7 [petM]. 84 115 IPR012595 GO:0009512
Cca07g00411 122 SUPERFAMILY PetM subunit of the cytochrome b6f complex 85 117 - -
Cca07g00411 122 PANTHER REDUCTASE, PUTATIVE-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00411 Cca-Chr7 5423359 5424174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00411 - - gmx:100306520 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00411 07 5423359 5424174 Cca07g00411 07 5423359 5424174 ECH