Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00381 ATGCTAGAGGCAATGGAGAGTTCGGTCAATGGAGGCTTCTCTCATTTGCAGAGCTGTGGAGACAGTAGCGAAGAGGAGTTATCAGTGCTTCCTCGCCACACCAAAGTGGTTGTAACTGGAAACAACCGCACCAAATCGGTCCTCGTTGGTCTTCAAGGTGTTGTTAAGAAAGCCGTTGGCCTTGGCGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTGAAGCTCCAGAGGAATGCTCTTAGTGTGATTGAGGCACCCACTGGTAACGAGGAGGACGATGACCTTGAATTTGAAAATATGCAGTGGAATGGATCAGATATGGCATCGGACGACACACAGAAATCCCACAAATCGAGGCATAGAATGCATAGAGCATTGGGATCATCTCACAAGACCATGAGTAGGTCCTTCTCTGGCGATTCACAGTCGAAGGGGTCCGTTTCTATGCCTCATGGGTCCACGATGGTCGATTTGAGCAAACTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTAGTGGATGCGGTCCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAAAGGCATTTCATGTCGCAGCAAATGGACGAGTTGCAGGTCATCATGGGATTTGTTCAAGCTGCGAAGAGGCTTAAGACTGTGTGCAAATGA 672 0.4777 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00381 223 MobiDBLite consensus disorder prediction 131 153 - -
Cca07g00381 223 PANTHER SAP30 1 223 IPR024145 -
Cca07g00381 223 MobiDBLite consensus disorder prediction 107 153 - -
Cca07g00381 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Cca07g00381 223 Gene3D - 138 223 IPR038291 -
Cca07g00381 223 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00381 Cca-Chr7 4964971 4968527 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00381 - - gmx:100809195 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00381 07 4964971 4968527 Cca07g00381 07 4964971 4968527 ECH