Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00366 ATGGCGGCGGAGATAGCATGCTGCGGAACAAAGTTTTCACTGTACGTGCTGGTCATCGTAGGTTTGGTGTGCTTCGCGGGCCTAATGGCTGGGCTCACCCTTGGCCTCATGTCTTTGGGCCTTGTCGACCTCGAAGTTCTCATGAAATCTGGTCGTCCTCAGGATCGAATCCACGCTTCGAAAATATATCCAGTGGTAAAGAACCAGCATCTTCTGCTTTGCACACTTTTAATTGGAAACTCCTTAGCCATGGAGGCTCTTCCCATTTTTCTTGATTCTCTCGTGCATCCCGCCGCAGCAATCTTGATTTCGGTCACCCTCATCCTCATGTTTGGAGAGATATTGCCACAAGCAATTTGTACAAGATATGGATTAACAGTTGGAGCAACGTTGGCTCCACTTGTTCGTGTTCTTCTTATAGTTTTCTTCCCCGTGTCTTATCCAATCAGCAAGGTTCTAGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAGACTTTTGTGAGTTTTCATGGAAATGAGGCTGGTAAAGGAGGAGATTTAACTCATGACGAGACAACCATCATAACTGGTGCACTTGAATTGACAGAAAAGACTGCCAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATAGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAGAAAACCAATATTATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTTAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTGTATGATATACTGAATGAATTTCAGAAAGGTCACAGTCATATTGCAGTTGTGTATAGGGATCTAAATGATAAAAACAAAGCTCCCAAAAGGATTAATGATGGGGAACAACTTGATCTTAAGGACAACTGTAAGAATAAAGGAAAGAATGCACACTTGAATAAAGGTGCTAATTTGGAGTCACGTGATACTACTTTGACTACTGTTACTAAGATTGACGATGCTCAACAAGCAAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATAGGGGTTGTTCATTTTGCATTCTGGACATTGAAAATGCTCCTCTGCCAGTGTTTCCACCAAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATCGAAGAGCTTCTTCAGGTTAATAGCTTTAATCCACTCTACTTGGAATTAGTGGTTTGGTTTTGGCTCCAAATTATTTAG 1317 0.4153 MAAEIACCGTKFSLYVLVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIHASKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPLVRVLLIVFFPVSYPISKVLDWMLGKGHAALLKRAELKTFVSFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKNKAPKRINDGEQLDLKDNCKNKGKNAHLNKGANLESRDTTLTTVTKIDDAQQAKKSPPATPAFKKRHRGCSFCILDIENAPLPVFPPNEVVVGVITMEDVIEELLQVNSFNPLYLELVVWFWLQII 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00366 438 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Cca07g00366 438 SUPERFAMILY CBS-domain pair 195 417 IPR046342 -
Cca07g00366 438 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 2 419 IPR045095 GO:0010960
Cca07g00366 438 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Cca07g00366 438 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 419 - -
Cca07g00366 438 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Cca07g00366 438 Gene3D - 189 322 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00366 Cca-Chr7 4737620 4742052 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00366 K16302 - gmx:100804572 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00366 07 4737620 4742052 Cca07g00366 07 4737620 4742052 ECH