Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00360 ATGGGCGAACACACGCTAGGTCAAGGACAATCCCTAATccaaccccaaccccaaccccaaccccTCCCCGCCGCCACGCCGCCGGACTCCGACCTCGCCAATGTCCCACCGCAGACACACTCCCCCGCCACCAAAATCCCCCTCCGCCCCCGCAAGATCCGCAAGCTCTCTCCGGACCCTTCCACCTCCGAATCCCAAACCGAGCCCCCCAAACCCGCCAAGTCCGGCGGCCGGAGCACGAAGCCCCCTCCTCCGCCGCGCGCCCTGGCGGTGGTTCCACGCATAGTGGCGCGGTCACTGTCGTGCGAGGGGGAGGTTGAGATCGCACTCCGATTCCTCCGCAACGCGGACCCAGTCCTCTCCCCTTTAATCGACATTCACCAACCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCCCTCACGCGCAGCATTCTCTACCAGCAGCTCGCGTACAAGGCCGGCACCTCCATCTACACGCGCTTCATCGCCCTCTGCGGCGGCGAAAACGGCGTCGTTCCCGACACCGTGCTCGCCCTCACGCCGCAGCAGCTTCGGCAGATTGGGGTTTCGGGGCGCAAGGCGAGTTACCTCCACGACCTGGCGAGGAAGTACCAGAACGGGATACTCTCCGATTCGGCCATTGTGAACATGGACGACAAGTCGCTCTTCACCATGCTCACTATGGTGAATGGGATTGGGTCCTGGTCCGTTCACATGTTCATGATTTTCTCTCTCCATAGACCCGATGTGCTACCCATCAACGACCTCGGTGTGAGGAAAGGGGTTCAGCTTCTTTACAACCTTGAGGACTTGCCACGCCCCTCGCAGATGGACCAGTTGTGTGAGAAGTGGAGGCCCTATCGCTCCGTTGCTTCCTGTGCGGTCGCGGTGGCCACTGGTGCCAGCTTGcatcaccagcaacagcaacagcagcaacaacagcCGCACCCTCCTCAGCCACAGCTTCTGGATCCCATAAATAGCATGTTTAATCTCGGGGCCGCCTGTGCTTGGGGACAATGA 1029 0.5763 MGEHTLGQGQSLIQPQPQPQPLPAATPPDSDLANVPPQTHSPATKIPLRPRKIRKLSPDPSTSESQTEPPKPAKSGGRSTKPPPPPRALAVVPRIVARSLSCEGEVEIALRFLRNADPVLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGENGVVPDTVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASCAVAVATGASLHHQQQQQQQQQPHPPQPQLLDPINSMFNLGAACAWGQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00360 342 MobiDBLite consensus disorder prediction 1 88 - -
Cca07g00360 342 Gene3D Hypothetical protein; domain 2 136 249 - -
Cca07g00360 342 Pfam HhH-GPD superfamily base excision DNA repair protein 144 287 IPR003265 GO:0006284
Cca07g00360 342 MobiDBLite consensus disorder prediction 306 326 - -
Cca07g00360 342 CDD ENDO3c 139 294 IPR003265 GO:0006284
Cca07g00360 342 Gene3D - 112 295 - -
Cca07g00360 342 PANTHER BNAC05G15000D PROTEIN 40 336 - -
Cca07g00360 342 MobiDBLite consensus disorder prediction 59 73 - -
Cca07g00360 342 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 40 336 - -
Cca07g00360 342 SMART endo3end 147 304 IPR003265 GO:0006284
Cca07g00360 342 SUPERFAMILY DNA-glycosylase 128 297 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00360 K01247 - gmx:100790760 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00360 07 4694359 4698648 Cca07g00360 07 4694359 4698648 ECH