Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00355 ATGCTAGGATTTTACCGGTTACTGCGCCTTGGCCAAAACCCTCCAAGGGGTGCAATATTTCAACAAGTACAAGGGAATGGAATCCTTAACCTAAACAAAATAAGATCAAGTTTTGGATGTGTCACGTCCTCTCCACGCATGCCGCATAAAGGATTGGAGAATGTCACGGTCTCTGAGGTACTAATGACTAAAGGGGAAGAAAATATCGGTTCCTGGCTTTGGTGCAGAGTTGATGATTCTGTTATTAATGCAATGAAGAGTATGGCTGATAACAACATTGGATCATTGGTGGTATTAAAACCAGAGGGTCAATATATAGCAGGCATTGTCACAGAAAGAGATTGCTTGAAAAAAATAGTTGCACCAGGAAGATCTCCCTTACACACACAAGTTGGTCAAATAATGACTGATGAGAATAACCTGATAACGGTGACCTCTGACACCAACATTCTTCAAGCTATGAGAATTATGACAGAGAATCATATCAGGCATGTTCCAGTTATAGATGGGAAAATAGTTGGTATGATTTCCATTGTAGATGTGGTGCGAGCAGTGATGGAGCAGCAAAGTGGAGAATTGAAGCGACTCAATGACTATATCAAAGGAGAATACTATTAG 618 0.4061 MLGFYRLLRLGQNPPRGAIFQQVQGNGILNLNKIRSSFGCVTSSPRMPHKGLENVTVSEVLMTKGEENIGSWLWCRVDDSVINAMKSMADNNIGSLVVLKPEGQYIAGIVTERDCLKKIVAPGRSPLHTQVGQIMTDENNLITVTSDTNILQAMRIMTENHIRHVPVIDGKIVGMISIVDVVRAVMEQQSGELKRLNDYIKGEYY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00355 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 204 - -
Cca07g00355 205 ProSiteProfiles CBS domain profile. 62 127 IPR000644 -
Cca07g00355 205 Gene3D - 50 204 IPR046342 -
Cca07g00355 205 CDD CBS_pair_bac_euk 75 183 IPR044725 -
Cca07g00355 205 SUPERFAMILY CBS-domain pair 51 192 IPR046342 -
Cca07g00355 205 Pfam CBS domain 73 120 IPR000644 -
Cca07g00355 205 Pfam CBS domain 131 186 IPR000644 -
Cca07g00355 205 ProSiteProfiles CBS domain profile. 135 193 IPR000644 -
Cca07g00355 205 SMART cbs_1 71 120 IPR000644 -
Cca07g00355 205 SMART cbs_1 140 186 IPR000644 -
Cca07g00355 205 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00355 Cca-Chr7 4679750 4682878 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00355 - - gmx:100778020 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00355 07 4679750 4682878 Cca07g00355 07 4679750 4682878 ECH