Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00351 ATGGGTACCCTTGGGAGAGCGATATACAGCGTTGGTTTCTGGATTCGAGAGACTGGTCAAGCCATTGATCGCCTCGGCTCTCGCCTCCAGGGCGGTTACTACTTCCAAGAACAGCTGTCTAGGCATCGAACTTTGATGAACATATTTGATAAGGCTCCTGTTGTTGATAAGGATGTGTTTGTTGCGCCGAGTGCCTCCGTCATTGGAGACGTTCAAGTTGGAAGAGGATCCTCCATTTGGTATGGATGTGTCTTGAGAGGTGATGTTAACAGCATTAGAGTTGGAAGCGGAACTAACATACAGGACAACTCTCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACACTTATTGGGGATAATGTTACTGTGGGTCATAGTGCTGTCATACATGGTTGTACTGTTGAGGACGAGGCTTTTGTTGGTATGGGTGCAATACTACTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTCAGACAGAATACAAGGATTCCTTCTGGCGAGGTTTGGGCAGGCAACCCCGCAAAGTTCCTGAGAAAGCTCACTAGTGAAGAGATAGCTTTCATCTCTCAGTCAGCTACCAACTATACTAACCTTGCACAGGTACATGCAGCTGAAAACTCGAAGTCCTATGAAGAAATTGAGTTTGAGAAGGTTTTGCGTAAGAAGTTTGCACGTAAAGATGAGGAGTATGACTCTATGCTGGGTGTTGTTCGTGAGATCCCACCAGAGCTTATTCTTCCTGATAATGTCTTACCTGATAAAGCAGAAAAAGCTCTTAAAAAGTGA 822 0.4526 MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGGYYFQEQLSRHRTLMNIFDKAPVVDKDVFVAPSASVIGDVQVGRGSSIWYGCVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLSGKVLPTLIGDNVTVGHSAVIHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLTSEEIAFISQSATNYTNLAQVHAAENSKSYEEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00351 273 Gene3D Hexapeptide repeat proteins 43 223 - -
Cca07g00351 273 CDD LbH_gamma_CA_like 54 212 - -
Cca07g00351 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Cca07g00351 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Cca07g00351 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
Cca07g00351 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00351 Cca-Chr7 4636845 4640564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00351 K01726 - gmx:100777972 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00351 07 4636845 4640564 Cca07g00351 07 4636845 4640564 ECH