Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00334 ATGGCGAAGCATTCGGTGGCAATGGCGAAGAAGCGGTGGCCAATCGTGTTGGCGGCATTCTTGTCTATCTCAACAGTGACGGTGCTCCTCATGAGACCCACCAGCTCCGATTCATGCAACATCAAGAACTTTGGTGGAGCACAGCAAGACAATCAGATTAGTTCCTCCGTCCAAATCGGAAATGCCGCTTCGAGTCCCCTGCATTTCATGAAGTCCAAGCTCGTTCTCATGGTTTCGCACGAGCTTTCTCTTTCAGGCGGGCCTTTGCTGCTGATGGAGTTGGCGTTTCTGTTGAGGGGCGTTGGTTCTGATGTTGTTTGGATCACCAATCAGAAACCCGGCGAACCTGATCCGGTTATTTACAGTTTGGAAAGTAAGATGTTGGACAGAGGAGTTCAGGTCCTGTCAGCCAAAGGTGAAGAGGCTGTTGATGTGGCACTTAAAGCTGATATGGTCATTCTAAATACTGCTGTTGCTGGAAAGTGGCTGGATGCCGTTCTTAAGGAAAAAGTTGACCGTGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCAATGATTGATTCACATACAACTGCCGAGTACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTAAAATGCCTGAAACTTATGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGAAGTTGCAGAAGATAGTGTAGCAAAGAGAGTTCTTCGTGAGCATGTTCGGGAATCTCTTGGAGTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCTCGTGGTAAAGGGCAGGATCTATTTCTTCGTTCCTTTTATGAAAGTTTGCAACTCATTCAGGAGAAGAAACTCCAGTTGCCATCTTTGCATGCTGTGGTCGTCGGGAGTGATATGGATAAACAGACGAAGTTTGAAATGGAACTGCGCAAATTTGTTGTTGAGAAAAAGATTCAGGACCGTGTTCACTTTGTTAACAAAACCCTGGCTGTGGCTCCTTACCTGGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGCAAGGGGAGAATGTTTTGGAAGGATAACCATTGAAGCAATGGCATTTCGGCTGCCTGTACTGGGAACAGCAGCTGGAGGCACGATGGAGATTGTGGTGAATGGTACAACCGGTTTGCTGCATCCTGTTGCAAAAGAAGGCGTGATACCTCTGGCAAAGAACATTGTGAAATTGGCAACTCATGTGGAGAAGAGGCTGACTATGGGAAAGAAAGGGTATGAGAGAGTGAAGGAGAGGTTTCTGGAGCACCATATGTCACAGAGAATTGCGTTGGTTCTGAAGGATGTTTTACAGAAGGCTAGGCAATAG 1398 0.4549 MAKHSVAMAKKRWPIVLAAFLSISTVTVLLMRPTSSDSCNIKNFGGAQQDNQISSSVQIGNAASSPLHFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQKPGEPDPVIYSLESKMLDRGVQVLSAKGEEAVDVALKADMVILNTAVAGKWLDAVLKEKVDRVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQLPSLHAVVVGSDMDKQTKFEMELRKFVVEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGLLHPVAKEGVIPLAKNIVKLATHVEKRLTMGKKGYERVKERFLEHHMSQRIALVLKDVLQKARQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00334 465 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 464 - -
Cca07g00334 465 Pfam Glycosyl transferases group 1 258 438 IPR001296 GO:0016757
Cca07g00334 465 Coils Coil 460 465 - -
Cca07g00334 465 CDD GT4_PimA-like 102 457 - -
Cca07g00334 465 Gene3D Glycogen Phosphorylase B; 244 443 - -
Cca07g00334 465 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Cca07g00334 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 461 - -
Cca07g00334 465 Pfam Glycosyl-transferase family 4 71 250 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00334 Cca-Chr7 4443048 4457811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00334 29 464 Glycosyltransferase AT1G75420 78.440 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00334 - - gmx:100791337 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00334 07 4443048 4457811 Cca07g00334 07 4443048 4457811 ECH