Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00320 ATGGGATTGAATTGCCATAGAAGCAGCGTTGTTAGTGTTCTTCTGCTTGTTGCTTGGGCAGAGATACGTGTGTGTATGAGTGGAAAGACTAGTACTTTTGTGAGAAATGATTATTTGTCGTTGGATATGCCAATAGATAGTGATGTGTTCCGTGTGCCTCCTGGTTACAACGCTCCCCAACAGGTGCATATAACACAAGGGGATCACGTGGGGAAGGGTGTCATCATCTCTTGGATCACCCAAGATGAACCCGGTTCAAGCACCGTCCTTTACTGGCCGGAAAATAGTGAATTCAAATGGCAAGCTCATGGCTTTTTCCTTTCCTACAAATACTTCAATTACACCTCTGGTTACATTCATCACTGTACTATTCACAATTTGGAGTTTGACACCAAATATTACTATGAGGTTGGAATAGGGAATACCACTCGACAATTCTGGTTCAAAACTCCTCCCCCTGTTGGCCCCGATGTTGCCTATACATTTGGTCTCATTGGGGATCTAGGCCAAACATACAATTCCAACACAACGCTTACCCATTACGAACATAGTCCGGCGAAAGGGCAAACAGTATTGTATGTGGGAGATCTCTCTTATGCGGATGATTATCCATTTCATGATAACATAAGGTGGGATACATGGGGAAGATTCACTGAGAGAATTGCAGCTTATCAGCCTTGGATTTGGACTGCAGGAAATCATGAAATTGATTTTGCTCCACAACTTGGTGAAACCAAGCCATTCAAGCCTTATACTTCTCGTTATCATGTACCGTACAAAGCATCAGATAGCACATCTCCATTGTGGTACTCTATCAAGAGAGCTTCAGCATACATCATTGTTATGTCTTCTTACTCAGCTTTAGGTAAATACACTCCTCAGTACAAATGGCTTGAAAAGGAACTACCAAAGGTGAACAGGACAGAGACACCGTGGTTGATAGTCCTCATGCATAGTCCAATATATAATAGTTATGTGAATCACTATATGGAAGGGGAGACCGTTCGAGTAATGTACGAGAAATGGTTTGTGGAATATAAAGTCGATGTTGTCTTTGCTGGTCATGTTCATGCTTATGAAAGATCTGAACGTGTATCAAATGTTGCATATAATATTGTAAATGGGCTATGCAACCCCATCAATGACCAATCTGCCCCAGTTTACATAACAATTGGTGATGGAGGAAATTTAGAAGGACTGGCCACTGCTATGACAGAACCCCAGCCAAGCTATTCAGCATACCGTGAAGCCAGTTTTGGTCATGGGATTCTTGATATAAAGAATAGAACTCATGCCCACTTTAGTTGGAATCGTAATCAAGATGGATATGCAGTGGTGGCTGATTCTATTTGGTTGCATAACAGATACTGGAGCTACCCAGAACAAACATCTCTTGCTTCATTTCGGTAG 1410 0.4199 MGLNCHRSSVVSVLLLVAWAEIRVCMSGKTSTFVRNDYLSLDMPIDSDVFRVPPGYNAPQQVHITQGDHVGKGVIISWITQDEPGSSTVLYWPENSEFKWQAHGFFLSYKYFNYTSGYIHHCTIHNLEFDTKYYYEVGIGNTTRQFWFKTPPPVGPDVAYTFGLIGDLGQTYNSNTTLTHYEHSPAKGQTVLYVGDLSYADDYPFHDNIRWDTWGRFTERIAAYQPWIWTAGNHEIDFAPQLGETKPFKPYTSRYHVPYKASDSTSPLWYSIKRASAYIIVMSSYSALGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPIYNSYVNHYMEGETVRVMYEKWFVEYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCNPINDQSAPVYITIGDGGNLEGLATAMTEPQPSYSAYREASFGHGILDIKNRTHAHFSWNRNQDGYAVVADSIWLHNRYWSYPEQTSLASFR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00320 469 SUPERFAMILY Metallo-dependent phosphatases 158 458 IPR029052 -
Cca07g00320 469 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 10 465 - -
Cca07g00320 469 Pfam Purple acid Phosphatase, N-terminal domain 59 150 IPR015914 GO:0003993|GO:0046872
Cca07g00320 469 Gene3D - 155 464 IPR029052 -
Cca07g00320 469 PANTHER ACID PHOSPHATASE RELATED 10 465 IPR039331 GO:0003993
Cca07g00320 469 CDD MPP_PAPs 156 454 IPR041792 -
Cca07g00320 469 Pfam Calcineurin-like phosphoesterase 161 359 IPR004843 GO:0016787
Cca07g00320 469 Pfam Iron/zinc purple acid phosphatase-like protein C 385 446 IPR025733 -
Cca07g00320 469 Gene3D - 58 153 - -
Cca07g00320 469 SUPERFAMILY Purple acid phosphatase, N-terminal domain 38 152 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00320 Cca-Chr7 4283182 4286240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00320 117 442 Miscellaneous Gene Families AT1G13900 26.596 3.27e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00320 K22390 - gmx:100794124 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00320 07 4283182 4286240 Cca07g00320 07 4283182 4286240 ECH