Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00319 ATGAGATCGAATTTGCATATAGGTGTTGTGATTCTTTTTCTACTTATTGCATGGGTTTCACTTGTTATCACTGGAGAGATGTTTTTCTTCGCGATTAGAAAGACTGCTACTTTTGTCAGAAACGATTATTTATCGGTAGATATGCCTAAAGATAACAATGTTTTCCGTGTGCCTCCTGGTTACAATGCTCCCCAACAGGTGCATATAACACAAGGAGATCACGTGGGGAAGGGTGTCATCATTTCTTGGATCACCCCAGATGAACCCGGCTCAAGCACTGTTCTTTACTGGGCGGAAAATGGTGAATTCCAAAGGCAAGCACATGGCTTTGTCCTTTCCTACAAATACTTCAATTACACCTCTGGTTACATTCATCACTGCACCATTCACAATTTGGAGTTTGACACCAAATATTACTATGAGGTTGGAATAGGGAATAACACTCGACAATTCTGGTTCGAAACTCCTCCCCCTGTTGGCCCCGATGTCCCCTATACATTTGGTGTCATTGCAGGGGATCTAGGCCAAACATACAATTCCGGCACGACGCTTACCCATTATGAAAAAAATCCGGCGGAAGGGAAGACAGTATTGTATGTGGGGGATCTCTCTTATGCAGATGATTATCCATTTCATGACAACACTAAGTGGGATACATGGGGAAGATTCACCGAGAGAATTGCTGCTTATCAGCCTTGGATTTGGACTGCAGGAAACCATGAAATTGATTTTGCTCCACAACTTGGGGAAAACAGACCATTCAAGCCTTATACTTCTCGCTATCATGTACCATACGAAGTATCAAATAGTACATCTCCATTGTGGTACTCTATCAAAAGAGCTTCAGCATACATCATTGTTATGTCTTCTTACTCAGCTTTTGGTAAATACACTCCTCAGTACAGATGGCTTCAAAAGGAACTGCCCAAGGTGAATAGGACAGAGACACCATGGCTGATAGTCCTCATGCATAGCCCAATATATAATAGTTACGTGAATCACTATATGGAAGGGGAGACCGTCCGAGTAATGTACGAGAAATGGTTGGTTGAGTATAAAGTCGATGTTGTCTTTGCTGGTCATGTCCATGCTTATGAACGATTTGAACGTGTATCGAATCTTGCATACAACACTTTAAATGGGCAGTACAGACCCATCAATGATCAATCTGCCCCAGTTTACATAACGATTGGAGATGGAGGAAATGTAGAAGGACTGGCTACTGCTATGACAGAGCCCCAGCCAAGCTATTCAGCATACCGTGAAGCCAGTTTTGGGCATGGAATTCTTGATATAAAGAATAGAACTCATGCTCATTTTAGTTGGAATCGTAATCAAGATGGATATGCAGTAGTGGCTGATTCTATTTGGTTGCATAATAGACACTGGAGACAACCAGAACAGAAATAA 1410 0.4199 MRSNLHIGVVILFLLIAWVSLVITGEMFFFAIRKTATFVRNDYLSVDMPKDNNVFRVPPGYNAPQQVHITQGDHVGKGVIISWITPDEPGSSTVLYWAENGEFQRQAHGFVLSYKYFNYTSGYIHHCTIHNLEFDTKYYYEVGIGNNTRQFWFETPPPVGPDVPYTFGVIAGDLGQTYNSGTTLTHYEKNPAEGKTVLYVGDLSYADDYPFHDNTKWDTWGRFTERIAAYQPWIWTAGNHEIDFAPQLGENRPFKPYTSRYHVPYEVSNSTSPLWYSIKRASAYIIVMSSYSAFGKYTPQYRWLQKELPKVNRTETPWLIVLMHSPIYNSYVNHYMEGETVRVMYEKWLVEYKVDVVFAGHVHAYERFERVSNLAYNTLNGQYRPINDQSAPVYITIGDGGNVEGLATAMTEPQPSYSAYREASFGHGILDIKNRTHAHFSWNRNQDGYAVVADSIWLHNRHWRQPEQK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00319 469 Gene3D - 63 158 - -
Cca07g00319 469 PANTHER ACID PHOSPHATASE RELATED 19 468 IPR039331 GO:0003993
Cca07g00319 469 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 157 IPR008963 GO:0003993|GO:0046872
Cca07g00319 469 CDD MPP_PAPs 161 460 IPR041792 -
Cca07g00319 469 SUPERFAMILY Metallo-dependent phosphatases 183 463 IPR029052 -
Cca07g00319 469 Gene3D - 160 469 IPR029052 -
Cca07g00319 469 Pfam Calcineurin-like phosphoesterase 170 365 IPR004843 GO:0016787
Cca07g00319 469 Pfam Iron/zinc purple acid phosphatase-like protein C 391 452 IPR025733 -
Cca07g00319 469 Pfam Purple acid Phosphatase, N-terminal domain 64 154 IPR015914 GO:0003993|GO:0046872
Cca07g00319 469 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 19 468 - -
Cca07g00319 469 ProSiteProfiles Fibronectin type-III domain profile. 63 158 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00319 Cca-Chr7 4278907 4282107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00319 122 448 Miscellaneous Gene Families AT1G13900 27.394 1.33e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00319 K22390 - gmx:100789918 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00319 07 4278907 4282107 Cca07g00319 07 4278907 4282107 ECH