Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00318 ATGGAGACTCCTTCTAATGCTCCTATCGACCTAGATGACAAGGAGATGGAATTGGTGAGCAACGGTTGCGTGAATGTGCATGGTAGGATTGCTGACAAGCGAACAACTGGAGGATGGAAAGCATCCCCCTTTATCATAGTGAACGAGGTGGCAGAGAGGTTGGCGTTCTTTGCAATTGCAGTGAACATGGTGGCTTACTTGGTTTCTGAAATGCATCAATCGCTTCCAGACGCTGCTACCCACGTCACAGATTGGGTTGGTGCTGCTTATGTGCTTACCCTCCTTGGAGCGTTTCTAGCTGATGCTTACTTGGGTCGCTTCACCACCATCCTTCTTTTCTCTGCCGTTTATGCTGTGGGGATGATTATGCTTACACTTTCGGCTTCACTGGACACGTTACGCCCTCTTAAATGCACTGTTTGGCCATGCAAAGTGGCAAGCCAAGGCCAAACCGCGTTCCTCTACGGTGCACTTGCCCTCATTGCTTTGGGCACGGGTGGAATAAAGCCTTGTGTGTCGTCCTTTGGGGGTGACCAATTTGACGAGGGAGATGAGAAAGAAGTCCAGATGAAGTTCGGTTTCTTCAACTGGTTCTTCTTGGCCATCAACATGGGTGCCATCCTTGGAATCACGCTACTCGTTTACATACAAGACGTCGCAGGGTTTGGTTGGGGTTTTGGAATACCCGCTGCTGCCACCATCTGTTCTATCCTTATCCTACTTGCTGGTGTCAAGTATTACCGTTTCAAAAAGCCATTGGGAAGCCCTTTCACTAGGTTTCTTCAGGTTATAGTAGCCTCCCTCAGGAATCATCTAAACGGTGTCAAGGAAACTCGCCTCTACGAGGTCCAAACCACGCACTCAGATATTCCGGGCGCTCGCAAGCTTCCTCACACCGCACAATACAGGTTTTTTGACAAAGCAGCAGTTATGACGAACGCTGAGGAGAAAAGCAATCGATGGCGTACATGCACGGTGACACAAGTAGAAGAATTCAAATCCTTCATTCGAGTCCTTCCGGTGTGGGCTTCCACCATCGCTCTCTCCGTGTCCTACGCTCAGCTCTCAACGTTCTTCCTAAGCCAAGCCAGAATCATGGAGCGAACACTCGGGGGCTTCAAAATCCCCACAGGTTCTGTCCCCGTGTTCAGCGCCATCACCCTCGTGCTGGTACCCATCTACGAGAAACTGGCGGTGCCCTTTCTACGCAGCCTCACCGGGCACCAGCGCGGCATCACGTCGTTGCAACGAATGGGAGTGGGGCTATTGGTCTCGATCTTCGCCATGGCTTCGGCTGCGTTGGTCGAAAACAAAAGACGCGCGCAGGAGTCGGTGAGGATGAGCGTGTTCTGGTTGCTTCCTCAGTTCTTTCTGATGGGTGCTGCTGAAGTTTTCACCTATGTGGGACAGCTGGAGTTCTTCTACGATGAAGCGACGGATGGGACGAGGAGCATTAGCAGTGCGATGTTTTTGTGTGAGATTGGGATTGGAAGCTGGTTGAGCAGTGCGCTGGTGAAGATCATTGAGGGTGCGAGTGGTGGACAAGGCAAAGGGTGGTTGAGGAACCATCTTGCTGAGAGTAGGTTGGACTACTTTTATTGGGTGTTGACGGCCATCAATGTCGTTAATTTCTTGGTTTACTTGGCGGTGGCGTATTGTCACAGAGGGAAAGGAGCACTTGTGATGGATGAGGCCATGGTTGAATTCACTCAGCCAGACACAGGGAACCACCAACGAGAATTACCAAGTACCGTTTTCTGA 1761 0.5088 METPSNAPIDLDDKEMELVSNGCVNVHGRIADKRTTGGWKASPFIIVNEVAERLAFFAIAVNMVAYLVSEMHQSLPDAATHVTDWVGAAYVLTLLGAFLADAYLGRFTTILLFSAVYAVGMIMLTLSASLDTLRPLKCTVWPCKVASQGQTAFLYGALALIALGTGGIKPCVSSFGGDQFDEGDEKEVQMKFGFFNWFFLAINMGAILGITLLVYIQDVAGFGWGFGIPAAATICSILILLAGVKYYRFKKPLGSPFTRFLQVIVASLRNHLNGVKETRLYEVQTTHSDIPGARKLPHTAQYRFFDKAAVMTNAEEKSNRWRTCTVTQVEEFKSFIRVLPVWASTIALSVSYAQLSTFFLSQARIMERTLGGFKIPTGSVPVFSAITLVLVPIYEKLAVPFLRSLTGHQRGITSLQRMGVGLLVSIFAMASAALVENKRRAQESVRMSVFWLLPQFFLMGAAEVFTYVGQLEFFYDEATDGTRSISSAMFLCEIGIGSWLSSALVKIIEGASGGQGKGWLRNHLAESRLDYFYWVLTAINVVNFLVYLAVAYCHRGKGALVMDEAMVEFTQPDTGNHQRELPSTVF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00318 586 CDD MFS_NPF 43 552 - -
Cca07g00318 586 PANTHER PEPTIDE TRANSPORTER 14 567 - -
Cca07g00318 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca07g00318 586 Gene3D MFS general substrate transporter like domains 10 559 IPR036259 -
Cca07g00318 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 96 120 IPR018456 GO:0006857|GO:0016020|GO:0022857
Cca07g00318 586 Pfam POT family 107 512 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca07g00318 586 SUPERFAMILY MFS general substrate transporter 34 556 IPR036259 -
Cca07g00318 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 195 207 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00318 Cca-Chr7 4270250 4272433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00318 12 551 Organic Solute Cotransporters AT5G01180 46.237 7.82e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00318 K14638 - jre:108991324 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00318 07 4270250 4272433 Cca07g00318 07 4270250 4272433 ECH