Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00310 ATGGCAAGCCAAGGTTCAGAATCCGAGATAGAGCTGGTGGTAGACACGACCACCTCCAGAAACAGTGTCAAAAACCGCGAATCAACCTCCTCGATGGTCGCAAAGCGTTCCATAATGTCCCTAAATTCTATCCTAACCAAATTCCATGCAGGTTACTTCAGAATAAGCCTCTCCTTCGGTGGCCAAGCCTTGTTGTGGAAGACACTGATCGAACCAacacacgacgacacaaacacaaacacaaacacaACCACTCTACGTCACATGCTCTGCACGCTTCCCTCCGCCGCGTTCCTTGTACTATGGtctctgtctctctccattctcctgttactctctcttctctACCTTCTAAGGTGCTTGTTTTTCTTTAAGATGGTGAAGGCCGAGTTCTTGCACCCCGTGGGGGTGAACTACCTCTTCGCGCCGTGGATTTCGTGGCTCCTGCTGCTTCAGTCGGCGCCGTTCGTGCCTCCCAAAACGGCGACGTATTTGGTGCTGTGGTGGGTGTTTGCGGCGCCGGTGGTGGCGCTGGACGTGAAGATCTACGGGCAGTGGTTCACGAAGGGGAAGAGGTTTCTATCCGCTGTGGCGAACCCCACGAGCCAGATGTCGGTGATAGGGAACTTGGTGGGGGCACGCGCCGCCGCGCGTATGGGTTGGAAGGAGAGTGCGGTTGGGTTGTTTTCGCTGGGGATGGTGCATTACTTGGTCTTGTTTGTGACGCTTTATCAGCGTTTATCGGGTGAAGATCGACTTCCAGTGTTGTTAAGGCCCGTTTTCTTTCTCTTCTTTGCAGCTCCCAGTGTCGCTAGCTTGGCTTGGGAATCCATTGTTGGCACCTTTGATACTGCTTCCAAGATGCTCTTCTTTCTCTCCCTCTTCCTCTTCGCCTCACTGATTTGCAGGCCAGCCATGTTCAGGAGATCTATGAGAAGGTTCAATGTTGCTTGGTGGGCTTACTCCTTTCCAATTACCGTACTTGCTCTGGTTTCCACGGATTATGCACAAGAAGTCAAAGGAACTCTTTCGAACATCCTAATGTTCCTTCTTTTAGCTCTTTCAGTTCTTGTCTCGCTTGCTCTAACGTTCTTCACTTTCCTCAACTCTAAGATGCTTCTACCGGATAACGATCCTATAGCTAGCTTGCTCATTGGTTTACCAACAGTACAATAA 1176 0.477 MASQGSESEIELVVDTTTSRNSVKNRESTSSMVAKRSIMSLNSILTKFHAGYFRISLSFGGQALLWKTLIEPTHDDTNTNTNTTTLRHMLCTLPSAAFLVLWSLSLSILLLLSLLYLLRCLFFFKMVKAEFLHPVGVNYLFAPWISWLLLLQSAPFVPPKTATYLVLWWVFAAPVVALDVKIYGQWFTKGKRFLSAVANPTSQMSVIGNLVGARAAARMGWKESAVGLFSLGMVHYLVLFVTLYQRLSGEDRLPVLLRPVFFLFFAAPSVASLAWESIVGTFDTASKMLFFLSLFLFASLICRPAMFRRSMRRFNVAWWAYSFPITVLALVSTDYAQEVKGTLSNILMFLLLALSVLVSLALTFFTFLNSKMLLPDNDPIASLLIGLPTVQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00310 391 Gene3D - 42 374 IPR038665 -
Cca07g00310 391 PANTHER - 3 382 IPR030183 GO:0006873|GO:0008308|GO:0016021
Cca07g00310 391 CDD TDT_SLAC1_like 48 348 - -
Cca07g00310 391 Pfam Voltage-dependent anion channel 47 366 IPR004695 GO:0016021|GO:0055085
Cca07g00310 391 MobiDBLite consensus disorder prediction 1 28 - -
Cca07g00310 391 PANTHER OS11G0274300 PROTEIN 3 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00310 Cca-Chr7 4110879 4114033 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00310 - - gmx:100787036 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00310 07 4110879 4114033 Cca07g00310 07 4110879 4114033 ECH