Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00308 ATGGGGGCTCTCGCTACATTAGCCCCTTGGATTCCCGAGGACGATCTTCTACTCAAGAACGCCGTTGAGGCTGGTGCTTCCTTGGAGTCACTTGCGAAAGGTGCAGTGCAGTTTTCTCGAAAATATAGTATTAGAGAAATACAGGATAGATGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCCTCTGCTCGAATGACAAATTTTGAGCTTTCGGCTTCGCCTCTCCCACCGAAGTTCTACAGTTTTGGACACTCGAAAGAAAAGAAAGCTGTTTCTGCTAAGAAAAAGTCTGAAAGTGTTCGCAATTTGTATTACGCCAGGCGCAAAAGAATCCGTAATAATGTGTTAACTTCCATGGACTTAAGTTTTCTGGTTGATCCGGGGAATGGTAATTATGCAGTGAATGGAAATGAGCCTTTATCTGAAAATTGCTTGCCTGAAGGTGGGCCTTTGGATCATTTTTCAAATCTTGATCCTGCTCAGTATGCTTTTCCTGAAAATGTGATGGATGATAATGTTGCTTCTGATGGAGTTACCGCGGGTGTGTTTTGCCCTGGAGTTGTACTTAAGGAAGAACATCAAATTCTTGGAGATAATGTGCCTCTGAGTGGAGCTGTTGAGGATTTCGATGTTCCTAAAGAATTGGCTATAGATGGGTGGATTGGGGATGATAATTTAGAGAGAGTGCCTTTGCCCACTTTGGATCATATCAACAATGACGCTGGAAATATGTGTTCAGAGTTTGATGAAAACAATGGATTTGATTCACCTGAGTTAGAGTGTGGAACATCATTTAATTTATCTCCATTTCCTGAAATGCCAGTCTGGAGAACAGACGAGAGCATTCAAGAACCTGATATTACATGTGATGTTTTTAATGATACTATGGCTTGTGGGGAGGCTTATTTGGAAGAACTATCAAATTCTCTCTTCAACTTTAGTAGTGAGGAAGAACTCCTTCTGATGGATGTTGATGGAAGAGAAGGGATTGACAAGTCTTACTATGATGGTCTGAGTTCACTCCTACAAACTTCTTCAAATGATGTTAATCCAGATCAGATACCTAAAAAGGATGAAATTGAGATGTTAATGGCCTCACAGGAACATGTTATAAATCAGTCGGTTTCATGCCAAAAAGAAGTAGATGACAACCCAGGGTCAAGCTCTGGTGGTGTACAATCAAGCTCTAGTGGTGTACTGGTAGTTTACAAATTAGAGTTCCAAATGCCATCTTCTGCCTCGGCTAAAGACTCCCAATTTCCCGAACTAATTATTGAACCTAGTACCTGTACATTAAACGCCGAGTACCAAGAAATTCCATCCAATGATGATGTTTTCCTTCCATTTGATGTACCTCCTGTCATATTTCCTCCTTCAACTAAATCAACTTTTAAAGAATCCAATAAACCAATTTCATCATCTGTTCAAGATTATGGATTTACTAAGCATAGAGCTAGTGAAAGAGGTAAACCTTCGATGCATGTTGAACAGAAAAACCATGTAGAATCTCGTGCATCATCTCAGATGACAGGATCTCCTTGCTTCCCGGGACCTGTTGGTGGTTCTAAGGTAAAATGTGAGTTGCCTGCTAATCATGCATCACACACAGCGTCTAGGATTTCTGTTACTGTTTCTGGAAATAATGCTGCGAACAAAACAGATGCTCTTCTGCATCCAAATAAAAAGGAAGCTACCAACGTTGGCTTGGCGAATGATCCAAGCAATCATGTGGCCAGTTCTTTCATTAAGAAATCTACTGTCAATTCTGATGACTTCAGAAATCATCCTCAACCTAATGGTTCTATTATGAAAATTGAACAAGATTTAGCCTTGCCACTTCAAGATCACCTGTTGCAACATGCTGAAGTGGGACCCTCTGGTGTTCTTGAGTCAGAGCTGGTGGTAAATCCTCCAACATTAGATGAGGAAGAGGAATATATAGAGAGTGATGATGAGCTTCCGTCTTATTCTGATGTAGAGGCAATGGTTCTTGATATGGACTTGGATCCTGATGATCATCAGGATTTGTTTTATAATGAGGAAGTATCAAGATATCAACATGTTGAAAGTAAAAGAGCTATCATGAGGCTGGAACAGGGTGCACATTCTTGTATTCAGAGAGCCATTAATTCACATGGAGCATTTGCCATTTTATACGGTCGCCACTCAAAGCATTATATTAAAAAACCTGAGGTTTTACTTGGACGAGCAACAGAAGGTGTTCCTGTGGACATTGACTTGGGTAAAGGAGGGCAAGGCAATGCAATTTCTCGACGTCAGGCAATTATAAAGATGGATAAAGATGGATCATTCTACATCAAAAACTTTGGCAAGAGCTCAATCTTGGTAAATAGCAAAGAAGTGCTTACTGGCCAGTCTCAAAAACTGCATTCCAATTATCTGATTGAGGTGAGGGGCATGCCATTGATATTTGAGATAAATCAAACTCGTGTGAAGCAGTACCTGGATCACATTTCTGACAATTCACAGACCTTGTAG 2508 0.4059 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSIREIQDRWYSLLYDPVISAEASARMTNFELSASPLPPKFYSFGHSKEKKAVSAKKKSESVRNLYYARRKRIRNNVLTSMDLSFLVDPGNGNYAVNGNEPLSENCLPEGGPLDHFSNLDPAQYAFPENVMDDNVASDGVTAGVFCPGVVLKEEHQILGDNVPLSGAVEDFDVPKELAIDGWIGDDNLERVPLPTLDHINNDAGNMCSEFDENNGFDSPELECGTSFNLSPFPEMPVWRTDESIQEPDITCDVFNDTMACGEAYLEELSNSLFNFSSEEELLLMDVDGREGIDKSYYDGLSSLLQTSSNDVNPDQIPKKDEIEMLMASQEHVINQSVSCQKEVDDNPGSSSGGVQSSSSGVLVVYKLEFQMPSSASAKDSQFPELIIEPSTCTLNAEYQEIPSNDDVFLPFDVPPVIFPPSTKSTFKESNKPISSSVQDYGFTKHRASERGKPSMHVEQKNHVESRASSQMTGSPCFPGPVGGSKVKCELPANHASHTASRISVTVSGNNAANKTDALLHPNKKEATNVGLANDPSNHVASSFIKKSTVNSDDFRNHPQPNGSIMKIEQDLALPLQDHLLQHAEVGPSGVLESELVVNPPTLDEEEEYIESDDELPSYSDVEAMVLDMDLDPDDHQDLFYNEEVSRYQHVESKRAIMRLEQGAHSCIQRAINSHGAFAILYGRHSKHYIKKPEVLLGRATEGVPVDIDLGKGGQGNAISRRQAIIKMDKDGSFYIKNFGKSSILVNSKEVLTGQSQKLHSNYLIEVRGMPLIFEINQTRVKQYLDHISDNSQTL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00308 835 SUPERFAMILY SMAD/FHA domain 721 820 IPR008984 GO:0005515
Cca07g00308 835 Pfam FHA domain 737 806 IPR000253 GO:0005515
Cca07g00308 835 Gene3D - 684 827 - -
Cca07g00308 835 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Cca07g00308 835 CDD FHA 731 817 IPR000253 GO:0005515
Cca07g00308 835 ProSiteProfiles Forkhead-associated (FHA) domain profile. 735 791 IPR000253 GO:0005515
Cca07g00308 835 PANTHER FHA DOMAIN PROTEIN 1 833 - -
Cca07g00308 835 PANTHER MICROSPHERULE PROTEIN 1 1 833 IPR037912 GO:0002151|GO:0031011|GO:0071339
Cca07g00308 835 SMART FHA_2 734 791 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00308 Cca-Chr7 4075889 4082938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00308 - - gmx:100786493 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00308 07 4075889 4082938 Cca07g00308 07 4075889 4082938 ECH