Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00278 ATGGGAGAAAAATCGGGTTCCAAAGGTTGTTGCGGTTGGTTTATCGCGTTTCTGGTTCTGGCTCTCGTCGTTGTTGCTGTTGTTATTGGCGTTAAGAAGAAATTTGGTCACTCCGGTTCCGATAAGCCTGCTCCGGTTCCCGGTCCCCCTGGCGCCGTTGATCAAAAATACTCCTCTGCACTCAAAACGGCATTGCAATTCTTCGACGTACAGAAATCTGGTAAGTTAGTCGACAACAAAATAAGTTGGAGAGGGGATTCAGCTCTTAAGGATGGGAGCCAAGCGCAATTGGATCTGACGAAAGGAATGTACGATGCCGGGGATAACATGAAGTTTGGTTTTCCGATGGCTTTTACGGCCACCGTGTTATCGTGGGCCATTCTGGAATATGGAGATCAAATGGATCACGTTGGCCAGTTAGAGCAGGCACAGGATTCGCTCAAGTGGATCACTGATTATCTCATCAATGCACACCCTTCTGAGAATGTTCTTTATATTCAGGTGGGTGACCCTGTTGCAGATCACAAGTGTTGGGAAAAACCAGAAGCCATGACTGATGCACGACCACTCATACAAGTGAATGCATCTTGTCCTGGATCAGATGTTGCAGCTGAAACTGCAGCAGCCATGGCCTCAGCATCTTTGGTCTTTAAAAGGACTGATTCTACATATTCAAGCACTCTCCTCAAGCATGCAAAACAATTGTTTACTTTTGCTAACAAGAATAGAGGATCTTATAGTGAGAATATACCCGAAGTTCAGACATATTATAACTCAACTGGATATGGTGATGAACTTTTATGGGCAGCTAGCTGGCTCTATCATGCTACAGGTGATGATTCTTACCTTGAGTTTGTGACTGGCCAAGATGGAGAAGACTATGCTCAATGGGGAAGCCCAACCTGGTTCAGTTGGGATAACAAGCTTGCCGGAGCTCAGGTTTTGTTAGCTAGATTAAGCTTTTTTAAGGCAAAGGACATTTCAAATTCGTATGGCTCTGGGCTCAGTAGTTACAGGAAAACTGCTGAGGCTGTAATGTGTGGTCTTCTTCCGGATTCTCCAACAGCCACAAAAAGCAGAACAGATAGTGGTCTTATATGGGTGAGTGAATGGAACTCGCTGCAGCATCCTGTTGCATCTGCATTCTTAGCTGCTGTTTACAGTGACTATATGCTTACATCGCAGACACCAAAACTAAAATGTGATTCAGAATCCTTTACCCCGTCAGATCTTCGAGACTTTGCCAAGTCTCAGGCTGATTACGTATTGGGCAAGAATCCTATGAAAATGAGTTTTCTGGTGGGCTATGGAGATAAGTACCCAGAATTTGTGCATCATAGGGGGGCTTCAATTCCTGCTAATGCAAAAACTGGCTGCAAGGATGGCTTCAAGTGGCTTGAGTCATCTAATCCTAATCCCAATGTAGCTACTGGAGCACTTGTTGGTGGACCCTTCAAAAATGAGACTTTCATCGATTCCAGGAACAATTCCATGCAAACAGAACCAAGCACATACAACAGTGCTGTCATAGTCGGTCTCTTGTCAAGTTTAGTCACCACATCTTCAATTGTTCAATCCTTTACCTAA 1587 0.4455 MGEKSGSKGCCGWFIAFLVLALVVVAVVIGVKKKFGHSGSDKPAPVPGPPGAVDQKYSSALKTALQFFDVQKSGKLVDNKISWRGDSALKDGSQAQLDLTKGMYDAGDNMKFGFPMAFTATVLSWAILEYGDQMDHVGQLEQAQDSLKWITDYLINAHPSENVLYIQVGDPVADHKCWEKPEAMTDARPLIQVNASCPGSDVAAETAAAMASASLVFKRTDSTYSSTLLKHAKQLFTFANKNRGSYSENIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLEFVTGQDGEDYAQWGSPTWFSWDNKLAGAQVLLARLSFFKAKDISNSYGSGLSSYRKTAEAVMCGLLPDSPTATKSRTDSGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSQTPKLKCDSESFTPSDLRDFAKSQADYVLGKNPMKMSFLVGYGDKYPEFVHHRGASIPANAKTGCKDGFKWLESSNPNPNVATGALVGGPFKNETFIDSRNNSMQTEPSTYNSAVIVGLLSSLVTTSSIVQSFT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00278 528 Pfam Glycosyl hydrolase family 9 57 514 IPR001701 GO:0004553|GO:0005975
Cca07g00278 528 PANTHER ENDOGLUCANASE 2 7 528 - -
Cca07g00278 528 Gene3D - 54 521 IPR012341 GO:0005975
Cca07g00278 528 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 421 447 IPR018221 -
Cca07g00278 528 PANTHER ENDO-1,4-BETA-GLUCANASE 7 528 - -
Cca07g00278 528 SUPERFAMILY Six-hairpin glycosidases 55 519 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00278 Cca-Chr7 3548291 3555042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00278 1 527 Glycoside Hydrolase AT1G75680 69.508 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00278 - - gmx:100820195 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00278 07 3548291 3555042 Cca07g00278 07 3548291 3555042 ECH