Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00269 ATGAAGGGAAGCAAAAGGTCGATCCACGCCGTCACGACATGGGTTCGGCGGCAACCGCCCAAGATGAAGGCCTTTCTCGCCGTCCTATTGGGCCTCGCCGCCTTGCTCTTCCTCAGAATCGTCGTCCACGACCACGACAGCCTCTTCGTCGCCGCCGAGTTTGTCCATGCATTAGGAATCTCCGTCCTCATTTACAAGCTCACCAAGGAAAAAACCTGCGCCGGGCTTTCGCTTAAATCGCAGGAGCTGACGGCTATGTTTCTAGGTGTTAGACTCTACTGCAGTTTTGTGATGGAATATGATATACACACCATACTTGATATGGCTACATTGGTGACCACCCTCTGGGTTATTTATATGATACGCTTCAAGCTGAAAGCTAGTTATATGGATGATAAGGACAACCTTGCAATATACCATGTGGTGATACCTTGTGCTTTGCTGTCCTTGCTTATTCATCCGACAACCCGGCATCACACAGTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTTCCTCAGTTGCGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACGGCTCACTATGTTTTTGCCCTCGGAGTTGCTAGGTTCTTGAGTTGTGCACATTGGGTTCTCCAGGTATTAGATACTCGTGGGCGTCTACTTACTGCATTGGGTTATGGATTGTGGCCTTCTATGGTTCTTCTATCAGAAATTGTCCAAACTTTCATCCTGGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTTGGGGGACAACTGGTACTTCGACTTCCTTCAGGAGTGGTGTAA 819 0.4725 MKGSKRSIHAVTTWVRRQPPKMKAFLAVLLGLAALLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKEKTCAGLSLKSQELTAMFLGVRLYCSFVMEYDIHTILDMATLVTTLWVIYMIRFKLKASYMDDKDNLAIYHVVIPCALLSLLIHPTTRHHTVNRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00269 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca07g00269 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00269 Cca-Chr7 3461538 3464376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00269 4 272 Miscellaneous Gene Families AT4G38790 81.041 1.76e-166 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00269 - K10949 gmx:100787747 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00269 07 3461538 3464376 Cca07g00269 07 3461538 3464376 ECH