Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00263 ATGGGAGCGGTTTGTTCGGCTGGTATGGTGGAGAAAAATGCTGAACTCGGAGGGAAGAGTTCGGGCTTTTCTGGGAAGCTTAAGAAGGAAAATAACTATGTGAATCGGGGAGAAATTTTTTCAGATTCACGGTCTAATACTGGTGCTCAAGGTAAAAAGCAAAAGAAGCGCGACACTGAATTTTCGCATGAACTGGGTTTATCGACTCCTACTTCAACTGGGGGAAAACAGGTGAACCATAGGGGTTCTTTTCTGGGAAAAGCTAGCGAGAGGGCAGTGGAAGTTCTGGACACACTTGGGAGTGGCATGCCAAAGTTAAACACTAGTAGTGGGTTTGTCTCTGGCACGACTTCTAGAGGGAAGAAAATATCAGTATTGGCATTTGAAGTTGCTAATACAATAACCAAAGGAACAATTTTGCTTCAATCACTTTCTGAGGAGAACATTCAGTTCCTTAAAATGGAGGTTTTACAATCTGAAGGGGTTCAGCTACTAGTTTCCACTGATATGAAGGAGCTAATTAGCCTGGCTGAGGCTGACAAAAGGGAAGAGTTCAATGTCTTCTCACGGGAAGTGGCTAGATTTGGAAATATGTGTAAAGATCCACAGTGGCACAACCTAGATCGATATTTCTCAAGATTACACTTGGATGCCCCGGGTGACAAACAATATAAGGTAGAGGCAGAAAAGACAATGCAGGAGTTTACCAGCCTAACTCGGCATACTGCTGAACTGTACCATGAATTAAATGCTTATGAACGTTTTGAACAAGATTATTTGCAAAAGATTAAGGAGATGGAGTCCTTAAATCTTCCTCTAAAAGGGGAGAGTATTACAATGTTTCAAAGCGAGCTAAAACACCAAAGAAAGTTTGTTAGGAGCTTGAAAAAGAAGTCTCTTTGGACAAGAAATTTGGAGGAGATAGTTGAAAAGCTCGTTGATATTGTTATCTATATACATCAAGCAATTTATGAGTTCCTTGGAAACCATGGTACATCTGCAACCAAGTTCAGTGAGGGTCCTGAAAGACTAGGAGAAGCCGGTCTTGCGCTGCACTATGCTAACATCATCAATCAGATAAATATGATTGCATCTCGCCCAACTGCTCTTCCTCCAAACACAAGAGACACATTGTATCATGGTTTGCCCAATAATATCAAGACTGCTCTTCCATCCCAGTTACAAACCATTGCTGATATGAAAGAGCTCTCCATCACTCAGATCAAAGCTGAAATCGATAAGATTCTCCAGTGGCTTGTACCATTTGCGACAAATACAGTCAAAGCACATCAAGGTTTTGGATGGGTTGGCGAATGGGCAAACACAAGTAATGACTTTGGCGATGACACCTCCACAGAAAGTAATCTGATTCGCCTGCAGACACTTTATTATGCAGATAAGAGAAAGATAGATATTTACATCATTGAGTTGTTGGCATGGCTTCACCATTTGATTAGCTTTGTAAAATCTAGACAAAATACATTGAGACCAATGCCTATAAGGTCTCCTCCTAAGGGACTAGAACTTCAGTCTAAGATGCGACAGTTTTTAATTCTGTCTGTGGATAGTAGCAACAAGCCGTTGGGATCTCAAATTTCCCAGGAGGATAGGAAATTATTGGAGGAGGTAATTGCAAGGAGAAAGAACCCAGGACTTAGCAAAAGCGAGGATCTTGGTTTGGCCAAGAAAAGACAAATCAAGGACTCTCATGTGGCCAAAAGTGCTGGGAGTTCGCCTGCTGGGGAATTCTTTGGTGCAAGACTCGTCTTTAAACCCCAAAACCATAACGTTTTGGATATTATGGATGGGTTGGGTTACTGA 1821 0.4174 MGAVCSAGMVEKNAELGGKSSGFSGKLKKENNYVNRGEIFSDSRSNTGAQGKKQKKRDTEFSHELGLSTPTSTGGKQVNHRGSFLGKASERAVEVLDTLGSGMPKLNTSSGFVSGTTSRGKKISVLAFEVANTITKGTILLQSLSEENIQFLKMEVLQSEGVQLLVSTDMKELISLAEADKREEFNVFSREVARFGNMCKDPQWHNLDRYFSRLHLDAPGDKQYKVEAEKTMQEFTSLTRHTAELYHELNAYERFEQDYLQKIKEMESLNLPLKGESITMFQSELKHQRKFVRSLKKKSLWTRNLEEIVEKLVDIVIYIHQAIYEFLGNHGTSATKFSEGPERLGEAGLALHYANIINQINMIASRPTALPPNTRDTLYHGLPNNIKTALPSQLQTIADMKELSITQIKAEIDKILQWLVPFATNTVKAHQGFGWVGEWANTSNDFGDDTSTESNLIRLQTLYYADKRKIDIYIIELLAWLHHLISFVKSRQNTLRPMPIRSPPKGLELQSKMRQFLILSVDSSNKPLGSQISQEDRKLLEEVIARRKNPGLSKSEDLGLAKKRQIKDSHVAKSAGSSPAGEFFGARLVFKPQNHNVLDIMDGLGY 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00263 606 MobiDBLite consensus disorder prediction 64 79 - -
Cca07g00263 606 MobiDBLite consensus disorder prediction 36 79 - -
Cca07g00263 606 MobiDBLite consensus disorder prediction 49 63 - -
Cca07g00263 606 Pfam Domain of unknown function (DUF3475) 125 181 IPR021864 GO:0045927
Cca07g00263 606 PANTHER OS01G0873900 PROTEIN 1 604 IPR045021 GO:0045927
Cca07g00263 606 PANTHER DUF668 FAMILY PROTEIN 1 604 - -
Cca07g00263 606 Pfam Protein of unknown function (DUF668) 343 428 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00263 Cca-Chr7 3337910 3342212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00263 - - gmx:100780634 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00263 07 3337910 3342212 Cca07g00263 07 3337910 3342212 ECH