Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00259 ATGGATCCGAACACTTCACCACCGTGCCCCGGCACAATCACCGTTCGTCGGAACCCTCCTCGGAGAGCTCGCGCCACTCCCAATCCCAAAGCGACACCGCAAAGCTTCGTCTTACCCGAAATCCGGCCATTTCCCAACGACGACGTTTCGTCCGCAGTCGCACAGACACTAGAAATCCCGCCAACGACTCTCCCCAAACCGGAGAACGAAAACCTAAAGGTTTTCCTCAGAATCCGACCCCTCCCATCGTCGCCAATTCAAGCTCCGCGCGTGAGAGCCAAGAGCGCGTGGCCTCAGAACCCCGCCAAAAAGAACGCTCCCGCGGCGGGGGCTAGAATTTCGAAGAACAAGACCTCCACCGCCTGCATAACGGTCAATGACTCACAGTCGGTGACGCTATCAACTCCCTCGAGCTTTCAGGATTCGAAGCGAATCAAATCAGAGACTTATGGAGGCTTCTCGCACGTTTTCTCTTCCGACTCATCTCAGTTTCAAGTGTATGAGAGAATGGTGAAACCTTTGGTGGAGGAGTTTCTTAGTGGTAGAAGTGGAATGCTGGCTGCACTGGGCCCAAGTGGATCCGGGAAGACTCACACCGTGTTTGGCAGCCCCAGGGATCCTGGAATGGTACCTCTTGCCCTACGCCATATTTTCAAGGACACTGGGCCACATGCCACTCAAGCATCTAGAACCTTTTACATGTCGATATTTGAGATATGTTCTGAACGGGGTAAAGCAGAGAAACTGTTTGATTTGTTATCTGATGGCGGTGAAATAAGCATGCAGCAATCGACCGTGAAGGGATTGAAAGAGGCTCTCATCTCTAATGCTGAACAAGCAGAATCCTTGATAGCACAAGCAGTGCTTAAACGTGCGACTGCAATGACAAACACTAACAGTCAGTCGAGTCGGTCACAGTGCATCATTAACATTCGTGATGATCCCCCAAAATGTAAAGGGTTGGTCAATCCGAAGTCAAATGGTGCTGTTTTGACTATCATTGACCTTGCTGGAGCTGAAAGAGAAAAAAGAACTGGGAATCAGGGGGCAAGATTGCTTGAAAGCAATTTTATCAACAACACATTAATGGTGTTTGGCCTATGCCTAAGATCATTATTGGAGCACCAAAAAAATCGCAAGAAGCCGTTGCAGAAGCACTTCCAAAGCTCTATGTTAACCAGGTACCTGCGAGATTATTTGGAGGGCAAGAAGCGCATGTCCTTGATTTTAACAGCAAAGTCAGGAGAAGAAGATTATCTTGATACTTCTTATTTACTGAGACAAGCTTCTCCTTACATGCAGATCAAGTACAATGAAGTTGAACCACCGAACATAGTTTCCAAAAAAAGGCATTACCAATCTTCATCCATAATGGATAATACAAAACTATCACCTTTATCGGAACATCTAAAGAGACTGAGGCTTGTAAGTGAACATGTTGAACAGAATGATGAAAAACATGTTGAAGAAAGGAAGACTTTTACGGAAGATGCTGAAACACGTTGTAAATTAGATGCTAGTAGTTCAGTCTCTTTCAAGCCAGAGTGTGATAGCCATACCCGGAGTGAGAGAAGCCACATTATTATGCAGAATTTTGCTAAAGTTATATGGTGTGTTTTGAAGCAATATAATTCTAAACTGAAGGTTGCAGAAATAGAAATAGAAAGTCTCAAAGAAAGCATTGGGTATGAAAAGAAAAAATACTTGGAGTTGGAAACACAGTTAAACGAGTTTAAGGCATGTTGTACTTGCTGCAAAGGAGTAAAAATAAAGAATGGTCCTGAAGAATGTTCATCAGTGGGTCTTGACCAACCACATAATTGGGACCAACAGGAAACGTTTCATGCACAGTCATCATCTGAGCCCAGAGTTGACCAGTCAGATATAGAGGAGCCCGTGCTTGGTACTTCCTGTACGCAGTTAGATTCTGAAAACTTAGATAGGGAAGTTTTGTCCTCGTCAAAAACAGAGCATCATAGTGCTTTGGAGGTTGATGCTGAGATACCGAATGAAACATTTCATGCACAGTCATTATCTGAGCCCAGAGTTAACCAGTCAGATGAAGAGGAGCCCGTGCTTGGTACTTCTTGTACGCAGTTAGATTCTGAAAACTCAGATAGGGAAGTTTTGTCATTGTCAAAACCAGAGCATCATAGTGTTTCGGAGGTTGACGCTGGGAGCAAGATACTGAATGAATCAATTCATGCAAAATCATCATCTGAGCCTAAACTTGACCCGTCTGTTGAAGAGCCTACTCTTGGTACTTCCTGTACACAGTTGGATTCTGAAAAATCAGATAGGGAAATTTCAACCTCCTTGTCAAAAGCAGGGGATCATCATGCTTTGGAGGTTGAGGCCGTGAGCAAGATACCTAGTGAAATGTTTCATACACAGTCATCATCTGAGCCTAGACCTGACCAGTCAGATGAAGAGTCTATGCCTGGTATTTCCGGTACACAGGTAGATTCTGAAAAATCAGACAGGAAAATTTTGGTGTCCTCGTCAAAACAAAGACATAATGCTTTGGAGGTTGAGGCCGAGACCAAGATACCAAGTGAGTTGTTCGTTCCTTCATCATTAACAGAAGATGACATCTTGGATCCATCGTCGCCCAAAGATGTATCATCTACTAAAACACATAACCTTGTGGTTGATCCACGTGTTGAGATTGGTGTTGATAACTCCCGAAAACCTCCTAAGCCAAAAAGGACACTTATGCCTTCCTCATCTATGTTATCAAGGGACTTGAGAACCTTTGATCTCTGTGAGGAATCTGAGCCAAGAAAGGGGAATAGGAGCTCAAGGAAGTTAGCTGCACATGATCCTAAAATATCAAATGGAAGCATCTCTCTGCTCCACTTGCTTCAAGGTAGAAAAAACAATCTTCATCACTAG 2895 0.4432 MDPNTSPPCPGTITVRRNPPRRARATPNPKATPQSFVLPEIRPFPNDDVSSAVAQTLEIPPTTLPKPENENLKVFLRIRPLPSSPIQAPRVRAKSAWPQNPAKKNAPAAGARISKNKTSTACITVNDSQSVTLSTPSSFQDSKRIKSETYGGFSHVFSSDSSQFQVYERMVKPLVEEFLSGRSGMLAALGPSGSGKTHTVFGSPRDPGMVPLALRHIFKDTGPHATQASRTFYMSIFEICSERGKAEKLFDLLSDGGEISMQQSTVKGLKEALISNAEQAESLIAQAVLKRATAMTNTNSQSSRSQCIINIRDDPPKCKGLVNPKSNGAVLTIIDLAGAEREKRTGNQGARLLESNFINNTLMVFGLCLRSLLEHQKNRKKPLQKHFQSSMLTRYLRDYLEGKKRMSLILTAKSGEEDYLDTSYLLRQASPYMQIKYNEVEPPNIVSKKRHYQSSSIMDNTKLSPLSEHLKRLRLVSEHVEQNDEKHVEERKTFTEDAETRCKLDASSSVSFKPECDSHTRSERSHIIMQNFAKVIWCVLKQYNSKLKVAEIEIESLKESIGYEKKKYLELETQLNEFKACCTCCKGVKIKNGPEECSSVGLDQPHNWDQQETFHAQSSSEPRVDQSDIEEPVLGTSCTQLDSENLDREVLSSSKTEHHSALEVDAEIPNETFHAQSLSEPRVNQSDEEEPVLGTSCTQLDSENSDREVLSLSKPEHHSVSEVDAGSKILNESIHAKSSSEPKLDPSVEEPTLGTSCTQLDSEKSDREISTSLSKAGDHHALEVEAVSKIPSEMFHTQSSSEPRPDQSDEESMPGISGTQVDSEKSDRKILVSSSKQRHNALEVEAETKIPSELFVPSSLTEDDILDPSSPKDVSSTKTHNLVVDPRVEIGVDNSRKPPKPKRTLMPSSSMLSRDLRTFDLCEESEPRKGNRSSRKLAAHDPKISNGSISLLHLLQGRKNNLHH 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00259 964 MobiDBLite consensus disorder prediction 689 706 - -
Cca07g00259 964 Coils Coil 270 290 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 648 943 - -
Cca07g00259 964 Pfam Kinesin motor domain 128 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 Coils Coil 540 560 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 707 723 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 1 43 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 87 113 - -
Cca07g00259 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 436 IPR027417 -
Cca07g00259 964 PANTHER KINESIN-RELATED 69 761 IPR027640 GO:0003777|GO:0007018
Cca07g00259 964 ProSiteProfiles Kinesin motor domain profile. 71 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 SMART kinesin_4 69 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 MobiDBLite consensus disorder prediction 917 939 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 761 786 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 822 846 - -
Cca07g00259 964 Gene3D Kinesin motor domain 63 442 IPR036961 -
Cca07g00259 964 PANTHER KINESIN-LIKE PROTEIN KIF23 69 761 - -
Cca07g00259 964 MobiDBLite consensus disorder prediction 648 665 - -
Cca07g00259 964 PRINTS Kinesin heavy chain signature 385 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 PRINTS Kinesin heavy chain signature 330 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 PRINTS Kinesin heavy chain signature 296 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca07g00259 964 PRINTS Kinesin heavy chain signature 181 202 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00259 Cca-Chr7 3279677 3290326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00259 149 411 Miscellaneous Gene Families AT4G39050 30.657 6.59e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00259 K10401 - gmx:100794655 1454.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00259 07 3279677 3290326 Cca07g00259 07 3279677 3290326 ECH