Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00255 ATGAGAGGGGTGAACAGAGCAATGGTTCTAGGCAGAGCCTTAAGAAGCAATTTCACCGCCGCATCCGGTGCTATTGCCACCCTTCATCGAGTGCTTCCCCATGCCACACCCACACCAAATCCTTCTCTTGTTCCCACTGTCACCGCCTTTAGATATAAATACAATTCTGCTGCTGCCACTTCTCTCGCTCAAGACGCCCACACCAAACACTTAGATTTCAAACCCAAACAAGTTGTCCTCTTTCAGTACCAGGCTTGTCCATTCTGCAACAAGGTTGCAGCGTTTCTGGACTATTATGATATCCCATTCAAAGTGGTTGAGGTCAACCCCATCAACAAGAAGGAAATTAAATGGTCCGACTACAAGAAGGTGCCTATCCTCACAGTTGATGGTGAAAAAATGGTTGATTCTTCAGACATAATTGATAAGTTGATTAAAAGGATAAATCCAGATTATGATCTAGATGCAGAAGAAGAGAAGAAGTGGCGAAAGTGGGTGGATAATCATTTGGTGCATGTCTTGTCACCGAATATATATCGAAATGTTCCCGAAGCTCTTGAATCATTTGATTACATCACCACCCAAGGAAATTTCAGTTTGTCTGAAAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAGTTGAAGAAGAAACACAACATCACTGATGAGCGTGCAGCTCTGTATGGAGCTGCAGATCAATGGGTTGATGCTTTGAAGGGCAGAAAATTTCTTGGTGGGTTGGATCCTAATTTAGCAGATCTTTCTGTATTTGGTGTTCTAAGACCCATCCGTAATCTCAAGTCAGGTAGAGATATGGTAGAGCACACCCGGATTGGGAGATGGTTTTCTGAGATGGATCGTGCAGTAGGAGAGTCTTCCAGGGTGAGTGAGCATAGCTAG 921 0.4397 MRGVNRAMVLGRALRSNFTAASGAIATLHRVLPHATPTPNPSLVPTVTAFRYKYNSAAATSLAQDAHTKHLDFKPKQVVLFQYQACPFCNKVAAFLDYYDIPFKVVEVNPINKKEIKWSDYKKVPILTVDGEKMVDSSDIIDKLIKRINPDYDLDAEEEKKWRKWVDNHLVHVLSPNIYRNVPEALESFDYITTQGNFSLSERLVAKYGGAAAMYFVSKKLKKKHNITDERAALYGAADQWVDALKGRKFLGGLDPNLADLSVFGVLRPIRNLKSGRDMVEHTRIGRWFSEMDRAVGESSRVSEHS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00255 306 PANTHER GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN 1 303 - -
Cca07g00255 306 CDD GST_C_mPGES2 152 298 IPR034335 -
Cca07g00255 306 SFLD Prostaglandin E synthase like.1 49 303 IPR034334 GO:0050220
Cca07g00255 306 SUPERFAMILY GST C-terminal domain-like 152 296 IPR036282 -
Cca07g00255 306 SFLD Glutathione Transferase (cytosolic) 49 303 IPR040079 -
Cca07g00255 306 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 1 303 - -
Cca07g00255 306 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 76 153 IPR004045 -
Cca07g00255 306 ProSitePatterns Glutaredoxin active site. 80 96 IPR011767 -
Cca07g00255 306 Pfam Glutathione S-transferase, N-terminal domain 80 147 IPR004045 -
Cca07g00255 306 Gene3D Glutaredoxin 65 149 - -
Cca07g00255 306 ProSiteProfiles Glutaredoxin domain profile. 66 165 - -
Cca07g00255 306 Gene3D - 154 303 - -
Cca07g00255 306 SUPERFAMILY Thioredoxin-like 77 170 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00255 Cca-Chr7 3223332 3226558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00255 K05309 - gmx:100804696 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00255 07 3223332 3226558 Cca07g00255 07 3223332 3226558 ECH