Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00245 ATGACAAACTCTAGGTGGCTATCTCTCTTACGAAGAACAGGTAGATCTCGGAAGAAAGAACGCGAAGAAAGTAGCTTCAGCGGAACGCCAAACGTGAATGGAGAATACCTCAAAACATTCAGAACAAAGTCATACGTTGAAATATGCAACAAAGCACACGAGGAGTTGGGAAATGCAAGAACGGAAAGACTCTCTTCCACGTCTTCTTCTTCCTTTAACATGCACCTAACCGAATATCTTCTAGAACCACACCAAGAAATTGTAGCCAACATGAAGGTGCATCGTCTTCTGGTAGACTACTTCGAAGCCTCCTTAGAATCATGCCGTTGCTGCGACACAATCCTCCAAGCCATCCATCAAACGCGACTTGCTTACGCAAAAGTCACCAACATCATTGTCAAGCTAAGCCAAACAGCGCCTTATTATCATAACCGATCCCGAAACCCTATTCTCACACAACATTCTTCCCTCATGTTATTACAAAACAACCCTTTGTCTATCATTAGTCCCGTGCAGTTCCGTGACATCCACGACAGATACATGACCCTCTTACGTAGACTAACATCAAAGAGAGGGAAAATTCAAAGAACTTTAACCATTAAGCGCGTTTGCAAGAAGGTGGGAGGAATCGCTTTGGTCGTTTCGCAAAGCGTGCTTCTGGTGGCTTTATTGGCGTTTGCAGTTCACAGCGTAATTGGGTTGGTGGCTGCACCGTGTATAGCTAGCTTGTTTGGTTTGGTCATAAGGAAGAAATTTCGTGAAAGGGTGAACGGAAACTCTTGTGTGAGGCTATGTGAACAACTTGATGTTGCTGCGAAAGGGGTTTATGTGCTGCTTAATGAGTTGGATACTATGAGTCGTATGGTTAAGAGGTTGGATGATGAGGTTGAACATTGGAGAGAAGTTGGTAATATTTGTGTGAAGAATTATAAGCGTGAAATATTGAAGCGGGTTGCGAAGGAATTTCAAGACAACGAATCTAACTTTTTGGGCATGTTGGAAGAGCTTGAAGAGCATATCTATTTGTGCTTTCTCACTGTAAACAGATCTAGAAAGTCGGTCATGCAAGAAATTACGAGGAACCAAGGTTAA 1092 0.4295 MTNSRWLSLLRRTGRSRKKEREESSFSGTPNVNGEYLKTFRTKSYVEICNKAHEELGNARTERLSSTSSSSFNMHLTEYLLEPHQEIVANMKVHRLLVDYFEASLESCRCCDTILQAIHQTRLAYAKVTNIIVKLSQTAPYYHNRSRNPILTQHSSLMLLQNNPLSIISPVQFRDIHDRYMTLLRRLTSKRGKIQRTLTIKRVCKKVGGIALVVSQSVLLVALLAFAVHSVIGLVAAPCIASLFGLVIRKKFRERVNGNSCVRLCEQLDVAAKGVYVLLNELDTMSRMVKRLDDEVEHWREVGNICVKNYKREILKRVAKEFQDNESNFLGMLEELEEHIYLCFLTVNRSRKSVMQEITRNQG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00245 363 Pfam Protein of unknown function (DUF677) 172 358 IPR007749 -
Cca07g00245 363 PANTHER UPF0496 PROTEIN 2-RELATED 14 361 - -
Cca07g00245 363 PANTHER UPF0496 PROTEIN 3-RELATED 14 361 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00245 Cca-Chr7 3095125 3096958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00245 - - gmx:100819660 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00245 07 3095125 3096958 Cca07g00245 07 3095125 3096958 ECH