Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00236 ATGTTTGTGCAGAATGTTCAGATTTTTGGTCTACTTGAACCTGTTGAAAGACTCGAGAGTTTAAGGGAGAGATCTTATTTTACTTCTGTAAACTATTGCAGTAGCAAACTGTTGAAATTAATATTGTATGAAAATGTTAATTCTGCTTATCATTTGGAACAGTCGAAAGAAGAATGTGAGTACATGATTGACCTTGCCAAACCTCATATGGTAAAATCAAGTGTTGTTGATAGCAAGACTGGGAAAAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTCCTGAAGAGGGGAAGAGACAAAGTTATCCAGAAGATAGAGAAAAGAATTGCTGATTTTACCTTCATACCTGTAGAGAATGGAGAAGGACTTCAAATTCTTCACTACGAAGTAGGCCAAAAATATGAGCCTCACTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGTATTGCTACAGTTCTTATGTACCTTTCAGATGTTGAGGAAGGTGGTGAGACCGTATTTCCTGCTGCCAAAGCGAATTTTAGTTCTGTGCCATGGTGGAATGATTTATCCCAATGTGCAAAAAAGGGTCTCTCAGTGAAACCAAAAATGGGTGATGCTCTGTTATTTTGGAGCATGAGGCCTGATGCCACACTAGATCCATCTAGTTTACATGGAGGTTGCCCAGTAATTAGAGGAAACAAATGGTCTTCAACAAAGTGGATGCATCTTCATGAGTACAAGGTTTGA 750 0.3893 MFVQNVQIFGLLEPVERLESLRERSYFTSVNYCSSKLLKLILYENVNSAYHLEQSKEECEYMIDLAKPHMVKSSVVDSKTGKSTESRVRTSSGMFLKRGRDKVIQKIEKRIADFTFIPVENGEGLQILHYEVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSQCAKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSSTKWMHLHEYKV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00236 249 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 35 249 - -
Cca07g00236 249 SMART p4hc 48 243 IPR006620 GO:0005506|GO:0016705|GO:0031418
Cca07g00236 249 Pfam 2OG-Fe(II) oxygenase superfamily 125 243 IPR044862 -
Cca07g00236 249 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 121 244 IPR005123 -
Cca07g00236 249 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 35 249 IPR045054 -
Cca07g00236 249 Gene3D q2cbj1_9rhob like domain 40 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00236 Cca-Chr7 3007103 3011845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00236 K00472 - gmx:100818586 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00236 07 3007103 3011845 Cca07g00236 07 3007103 3011845 ECH