Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00233 ATGGACTCTCTCTCTCTCTTGTGCACAGGAGCCCTGATCGCCGGCGGGCTGTACTGGTTCGTGTGCGTGCTGGGGCCGGCGGAGCAGAAGGGGAAAAGAGCGACGGATCTGTCGGGGGGGTCAATATCGGCGGAGAAAGTGAGGGAAAACTACAAGGATTACTGGTCGTTCTTCCGGCGGCCGAAGGAGATCGAAACGGCAGATAAAGTGCCAGACTTTGTGGACACATTCTACAATTTGGTGACGGACATATACGAGTGGGGGTGGGGGCAGTCCTTCCACTTCTCGCCCTCCATCCCAGGGAAGTCACACGGAGAGGCCACGCGCCTGCACGAGGAGATGGCGGTGGATCTAATCGAGGCGAGGGCCGGGGACAGGATCCTGGACGTGGGCTGCGGCGTGGGGGGGCCCATGCGAGCCATCGCGGCCCACTCGCGGGCGAACGTGGTGGGCATCACAATCAACGAGTACCAGGTGAAGCGGGCCAGGCTGCACAACAAGAAGGCCGGGCTGGACTCCCTCTGCGAGGTGGTGTGCGGGAATTTCCTCCAGATGCCCTTCCCCGACAGCACCTTCGACGGCGCCTACTCCATCGAGGCCACGTGTCACGCGCCCAAGCTCGAGGAAGTCTACGCCGAAATCTTTAGGGTTCTGAAGCCCGGCGCGCTCTACGTTTCCTACGAGTGGGTCACCACGGACAAGTTCCGCGCCGAGGACCCCGAACACGTCGAGGTCATTCAGGGGATTGAGAGGGGCGACGCGCTTCCCGGCCTCAGGAGCTACGCCGACATAGCCGCCGCCGCGCGTAAGGTTGGCTTCGTGGTGGTGAAGGAGCGGGATCTGGCTAAGCCCCCGGCCCAGCCCTGGTGGAGCCGATTGAAGATGGGCAGGATCGCCTACTGGCGGAACCACATTGTCGTAACTGTTCTCGCCGCATTGGGAATCGCGCCCAAGGGTACCGTCGATGTCCACGATATGCTTTTCAAGACCGCTGACTATTTGACCAGAGGCGGTGACTCTGGCATTTTCTCTCCGATGCACATGATCCTCTGCAGAAAGCCCCATCCCAAAGAAGAGGCCCAA 1083 0.6122 MDSLSLLCTGALIAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVRENYKDYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHGEATRLHEEMAVDLIEARAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVKRARLHNKKAGLDSLCEVVCGNFLQMPFPDSTFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTDKFRAEDPEHVEVIQGIERGDALPGLRSYADIAAAARKVGFVVVKERDLAKPPAQPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHDMLFKTADYLTRGGDSGIFSPMHMILCRKPHPKEEAQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00233 361 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Cca07g00233 361 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 355 - -
Cca07g00233 361 CDD AdoMet_MTases 126 230 - -
Cca07g00233 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 355 IPR029063 -
Cca07g00233 361 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
Cca07g00233 361 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Cca07g00233 361 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Cca07g00233 361 PANTHER - 1 355 IPR044625 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00233 Cca-Chr7 2983979 2985061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00233 116 281 Acyl Lipid Metabolism Gene Families AT1G73600 26.286 5.90e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00233 K08242 - gmx:100804517 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00233 07 2983979 2985061 Cca07g00233 07 2983979 2985061 ECH