Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00232 ATGGACAAGTTGAATGGGCTGAGCCACCTCTTCATGACTATGTTTCTTCATAACTTCGCCGTGTTCATGGTGGTACCAGCCATCACCGATGTCACAATGACTGCTCTTTGTCCCGGACAAGATGAGTGCTCACTTGCCATCTACCTCACTGGTTTTCAACAAGCGATGATAGGAGTGGGCACGCTTGTGATGATGCCACTTTTGGGTAATCTCTCCGATAAGTATGGTAGGAAGGCCATTCTCACAGTCCCTATGACTCTCACAATCATTCCCATAGGCATATTAGCTTACAGCAGGACGAAAAAATTCTTCTACGTGTATTACGTGTTTAAGATTCTCATTTCAATGGTTTGCGAAGGAAGCGTTCCTTGCCTCGCTCTAGCTTACGTGGCAGATAACATTCCAGAAAGTGGACGAAGCACTGCATTTGGAATTCTTTCAGGGATAGGGTCCGCTGCATTTGTGTGTGGCACCTTATCAGCTCGATTCTTATCTACTGCCCTAACTTTTCAGGTTTCCACTCTTATTGCGGTGATTGGAGCAGTGTACATGAAATTTTTCCTTCAAGATTCAATCATTGATGATAAACATCTTTATACCCCAATTATTTCACAAGGAAAGCCCACGATTTCTAAGGTCAACGGAAAACTGGAAAGTAACAAACATGTTTTTAAAGCATTGCATTTTTTGAAAGACCTAACCTCCATCCTCAATAGTAGCTTGACTATTACTCAAGCAGCAATTGTTGCATTCTTCAGTAACCTTGCAGATGTTGGCCTTCATGGTTCAATGATGTATTTCTTAAAGGCTCGATTTCACTTTGATAAGAATCAATTTGCCGACTTAATGGTCATTTCCGGAATTGCAGGGACCGTGTCACAGCTTCTACTTATGCCCATTTTGGCTCCTATTTTGGGTGAGGCAAGACTACTCTCAATTGGACTATTTTTTCATTGTATACATATGTTCCTTTACAGCATAGCATGGTCCTCGTTGGTTCCTTATGCTTCAGCCATGTTCTCAATTTTGTTTGTTTTCTCACAGCCTTGTATACGGAGTATTGTTTCTAAACAAGTTGGGCCCCATGAACAGGGAAAGGCTCAAGGTTGCATCTCAGGCATATGTTCAGTTGCACATATTGTTTCTCCCTTGGTTTTCTCTCCATTAACTGCCCTCTTCCTCTCTGAAAAGGCACCTTTTGATTTTCCTGGATTTAGTATAATGTGCATTGGCTTTGCTTCGATGATATCTTTCGTTCAGAGTATGATGCTTAGAGTGGTTCCTCCCATTTCGAGTTAG 1299 0.4196 MDKLNGLSHLFMTMFLHNFAVFMVVPAITDVTMTALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPLLGNLSDKYGRKAILTVPMTLTIIPIGILAYSRTKKFFYVYYVFKILISMVCEGSVPCLALAYVADNIPESGRSTAFGILSGIGSAAFVCGTLSARFLSTALTFQVSTLIAVIGAVYMKFFLQDSIIDDKHLYTPIISQGKPTISKVNGKLESNKHVFKALHFLKDLTSILNSSLTITQAAIVAFFSNLADVGLHGSMMYFLKARFHFDKNQFADLMVISGIAGTVSQLLLMPILAPILGEARLLSIGLFFHCIHMFLYSIAWSSLVPYASAMFSILFVFSQPCIRSIVSKQVGPHEQGKAQGCISGICSVAHIVSPLVFSPLTALFLSEKAPFDFPGFSIMCIGFASMISFVQSMMLRVVPPISS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00232 432 Gene3D MFS general substrate transporter like domains 7 421 IPR036259 -
Cca07g00232 432 SUPERFAMILY MFS general substrate transporter 10 416 IPR036259 -
Cca07g00232 432 Pfam Major Facilitator Superfamily 10 383 IPR011701 GO:0022857|GO:0055085
Cca07g00232 432 CDD MFS_SLC46_TetA_like 10 423 - -
Cca07g00232 432 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 5 428 - -
Cca07g00232 432 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 432 IPR020846 GO:0022857
Cca07g00232 432 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 5 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00232 Cca-Chr7 2950314 2958748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00232 2 428 Organic Solute Cotransporters AT2G16990 46.429 4.84e-122 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00232 - - gmx:100789917 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00232 07 2950314 2958748 Cca07g00232 07 2950314 2958748 ECH