Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00229 ATGGCCACCGTCCCCTCCGCCCCCGTCGCTATCCCCTCCTTCACCGGCCTCAAGGCCACCGGAGCCACCGCAGCCAAAGTCAGCGCCGCCGTCAAGGCCCCGAGGTTCGGCGGCATCAAGGCCTCGCTCAAAGACGTGGGAGTCGCCGTGGTGGCCACCGCCGCCAGCGCAGTGCTCGCCAGCAACGCCATGGCCATCGAAGTCTTGCTCGGTGGCGGCGACGGTTCCCTCGTGTTCGTTCCCAGCGAGTTCTCCGTGGCCCCTGGGGAGAAGATCGTGTTCAAGAACAACGCTGGTTTCCCACACAACGTTGTCTTCGACGAGGACGAGATTCCCGGTGGCGTCGATGCGGGGAAAATCTCTATGTCGGAAGAAGACTACCTTAATGGGCCTGGCGAGACTTACAGTGTTACTTTGGATGCCAAGGGTACCTACAGTTTCTACTGTGCGCCTCACCAAGGTGCTGATCGTTGGTTCTCCCTTTCATTAGATGTATAA 498 0.6024 MATVPSAPVAIPSFTGLKATGATAAKVSAAVKAPRFGGIKASLKDVGVAVVATAASAVLASNAMAIEVLLGGGDGSLVFVPSEFSVAPGEKIVFKNNAGFPHNVVFDEDEIPGGVDAGKISMSEEDYLNGPGETYSVTLDAKGTYSFYCAPHQGADRWFSLSLDV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00229 165 SUPERFAMILY Cupredoxins 63 154 IPR008972 -
Cca07g00229 165 CDD Plastocyanin 66 155 IPR002387 GO:0005507|GO:0009055
Cca07g00229 165 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 1 155 - -
Cca07g00229 165 PRINTS Plastocyanin signature 71 90 IPR002387 GO:0005507|GO:0009055
Cca07g00229 165 PRINTS Plastocyanin signature 94 112 IPR002387 GO:0005507|GO:0009055
Cca07g00229 165 PRINTS Plastocyanin signature 143 162 IPR002387 GO:0005507|GO:0009055
Cca07g00229 165 PRINTS Type I copper blue protein family signature 85 98 IPR001235 GO:0005507|GO:0009055
Cca07g00229 165 PRINTS Type I copper blue protein family signature 141 155 IPR001235 GO:0005507|GO:0009055
Cca07g00229 165 PRINTS Type I copper blue protein family signature 100 115 IPR001235 GO:0005507|GO:0009055
Cca07g00229 165 Gene3D - 66 159 IPR008972 -
Cca07g00229 165 TIGRFAM cyanin_plasto: plastocyanin 66 155 IPR002387 GO:0005507|GO:0009055
Cca07g00229 165 PANTHER PLASTOCYANIN 1 155 - -
Cca07g00229 165 Pfam Copper binding proteins, plastocyanin/azurin family 67 155 IPR000923 GO:0005507|GO:0009055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00229 K02638 - gmx:100499708 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00229 07 2935393 2936113 Cca07g00229 07 2935393 2936113 ECH