Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00225 ATGCATAATAGGAAGAAGATATTTGAaaaaaaagaaagaagcaagaggcaaagaaagaTGGGTGCAGATTGGGCTGAACTTCCCAAAGAGCTGGTGGAATCAATCTCGAAACTCCTAACCATCTACTCCGATTACCTCCGATTCCGTTCCGTCTGCCGGAGCTGGCGATCCTCCGTTCGGAAAACCCCCGTCCACCTCCCTCCCCAGCTCCCATGGCTCATGCTCTCCCACCGCGCCTTCTTCGACCTCTCCCTCCACAAAACCCACCTCCTCCGCAACCACCCTCAACCCCCTCACACCAGAATCTGCGCCTCCTCCCACGGCTGGCTCGCCCTCCTCGACCACACCCCCAACCTCCGCCTCCTCAACCCCCTCACGCGCGCCACGCGCTCCCTCCCCCCGCTCCACACCTTCCCCAACGTCCTCACCTTCAACCACTCCCTCGTGGGCCGCGAGTACCTAGTCGCCAACCCCCACGGCGCCGTCCACACGCTCAGCTCGCGACACGTGTGCACCTCCTTCCTCACCAAGCTCGTCCTCTCCCAGAGCCCCTCGCGAGGCCCCCACTTCGCCGCGCTCGCCATCGTCGCCCAGAACAACCTGGCCTTCTGCAGAAACGGCTCCGACGCGTGGATCTTCGTGAACGACGAGGACGGGGAACTCTACTGCTGGGAGGACGTTGTCGACTACAACGGCGTGTTTTTCGCGGTGAGTAAGGGAGGGACCATTGCGGTGTGCGATCCCGCTTGTTCTCGCTCCCCGCCCAGGGTTTCGCTTATTCAGCCAACGGCGCCGTTTGGCTTCGTCGGTGACATTAACTACGCGGTGTTTTCCGCCGGAGATTTCTTGCTCGTGACTCGCCTTCTCGATCAGGAGTTTTCTGACGCTGCCGGGGTGGAGTCCAACTTGGTGTACCGGACGGTGTCGTTTGAGGTTTTTAAGATGAATTGGGGGTTGCTGACGTGGCAGAGGCTCGACACTTTGGGTGACCGCGTTTTGTTTGTAGGGGGGAATTCTTCGCTGTCGTTTTGTGCGTCTGATTTCGAGGGTTGTTCTGCGGATTGCATCTATTTCACCGACGATTATTCGGAGTTGAATGACGATGATGCGTGTGGGAAGCATGATTTGGGGATTTTTAGGTTATGCGATAAGAGTATTGAACCCTTGCCGTGTTTTCCACCGGGTTCGTTTTCTCAGCTAGGGTGGCCGCTCCCAATTTGGCTCTCGCCCAATCCTTGTTGA 1242 0.5676 MHNRKKIFEKKERSKRQRKMGADWAELPKELVESISKLLTIYSDYLRFRSVCRSWRSSVRKTPVHLPPQLPWLMLSHRAFFDLSLHKTHLLRNHPQPPHTRICASSHGWLALLDHTPNLRLLNPLTRATRSLPPLHTFPNVLTFNHSLVGREYLVANPHGAVHTLSSRHVCTSFLTKLVLSQSPSRGPHFAALAIVAQNNLAFCRNGSDAWIFVNDEDGELYCWEDVVDYNGVFFAVSKGGTIAVCDPACSRSPPRVSLIQPTAPFGFVGDINYAVFSAGDFLLVTRLLDQEFSDAAGVESNLVYRTVSFEVFKMNWGLLTWQRLDTLGDRVLFVGGNSSLSFCASDFEGCSADCIYFTDDYSELNDDDACGKHDLGIFRLCDKSIEPLPCFPPGSFSQLGWPLPIWLSPNPC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00225 413 Pfam Protein of unknown function (DUF295) 324 379 IPR005174 -
Cca07g00225 413 Pfam F-box domain 24 64 IPR001810 GO:0005515
Cca07g00225 413 PANTHER OS07G0183000 PROTEIN-RELATED 22 411 - -
Cca07g00225 413 PANTHER F-BOX PROTEIN SKIP23-LIKE 22 411 - -
Cca07g00225 413 SMART fbox_2 27 68 IPR001810 GO:0005515
Cca07g00225 413 Gene3D - 23 64 - -
Cca07g00225 413 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 88 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00225 Cca-Chr7 2891348 2893220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00225 - - ccaj:109802153 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00225 07 2891348 2893220 Cca07g00225 07 2891348 2893220 ECH